point run_test_file_cases at ocean files... the land file will wait a…

… little longer
NOAA-GFDL · Nov 18, 2024 · 4f53f89 · 4f53f89
1 parent 240c32e
commit 4f53f89
Showing 1 changed file with 125 additions and 114 deletions.
diff --git a/run_test_file_cases.py b/run_test_file_cases.py
@@ -65,151 +65,162 @@ def run_cmor_RUN(filename, table, opt_var_name):
     return FOO_return
 
 
-# 9) FAIL (4 dimensional data with no vertical) 
-# Result - error,
-# File "/home/Ian.Laflotte/Working/fre-cli/fre/cmor/cmor_mixer.py",
-#    line 134, in get_vertical_dimension    if not (ds[dim].axis and ds[dim].axis == "Z"):
-# AttributeError: NetCDF: Attribute not found
-testfile_LUmip_refined_gr1_Emon_landusedim = \
-    '/arch0/cm6/ESM4/DECK/ESM4_historical_D1/gfdl.ncrc4-intel16-prod-openmp/' + \
-    'pp/LUmip_refined/ts/monthly/5yr/' + \
-    'LUmip_refined.185001-185412.gppLut.nc'
-try:
-    some_return = run_cmor_RUN(testfile_LUmip_refined_gr1_Emon_landusedim, 'Emon', opt_var_name = 'gppLut')
-except Exception as exc:
-    print(f'exception caught: exc=\n{exc}')
-    some_return=-1    
-    pass
-print_the_outcome(some_return,'LUmip_refined_gr1_Emon_langusedim / gppLut')
-sys.exit()
-
-
-# 1) SUCCEEDs
-# land, Lmon, gr1
-testfile_land_gr1_Lmon = \
-    '/archive/Eric.Stofferahn/CMIP7/ESM4/DEV/ESM4.5v01_om5b04_piC/gfdl.ncrc5-intel23-prod-openmp/' + \
-    'pp/land/ts/monthly/5yr/' + \
-    'land.005101-005512.lai.nc'
-try:
-    some_return = run_cmor_RUN(testfile_land_gr1_Lmon, 'Lmon', opt_var_name = 'lai')
-except:
-    print(f'exception caught: exc=\n{exc}')
-    some_return=-1
-    pass
-print_the_outcome(some_return,'land_gr1_Lmon / lai')
-
-
-# 2) SUCCEEDs
-# atmos, Amon / cl
-testfile_atmos_level_cmip_gr1_Amon_complex_vert = \
-    '/arch0/cm6/ESM4/DECK/ESM4_historical_D1/gfdl.ncrc4-intel16-prod-openmp/' + \
-    'pp/atmos_level_cmip/ts/monthly/5yr/' + \
-    'atmos_level_cmip.196001-196412.cl.nc'
-try:
-    some_return = run_cmor_RUN(testfile_atmos_level_cmip_gr1_Amon_complex_vert, 'Amon', opt_var_name = 'cl')
-except Exception as exc:
-    print(f'exception caught: exc=\n{exc}')
-    some_return=-1    
-    pass
-print_the_outcome(some_return,'atmos_level_cmip_gr1_Amon_complex_vert / cl')
-
-
-# 3) SUCCEEDs
-# atmos, Amon / mc
-testfile_atmos_level_cmip_gr1_Amon_fullL = \
-    '/arch0/cm6/ESM4/DECK/ESM4_historical_D1/gfdl.ncrc4-intel16-prod-openmp/' + \
-    'pp/atmos_level_cmip/ts/monthly/5yr/' + \
-    'atmos_level_cmip.195501-195912.mc.nc'
+# 6) FAIL (copy_nc failure!!! WEIRD)
+# ocean, Omon / sos
+# Result - error, AttributeError: NetCDF: Attempt to define fill value when data already exists.
+testfile_ocean_monthly_gn = \
+    '/archive/ejs/CMIP7/ESM4/DEV/ESM4.5v01_om5b04_piC/gfdl.ncrc5-intel23-prod-openmp/' + \
+    'pp/ocean_monthly/ts/monthly/5yr/' + \
+    'ocean_monthly.002101-002512.sos.nc'
 try:
-    some_return = run_cmor_RUN(testfile_atmos_level_cmip_gr1_Amon_fullL, 'Amon', opt_var_name = 'mc')
+    some_return = run_cmor_RUN(testfile_ocean_monthly_gn, 'Omon', opt_var_name = 'sos')
 except Exception as exc:
     print(f'exception caught: exc=\n{exc}')
     some_return=-1    
     pass
-print_the_outcome(some_return,'atmos_level_cmip_gr1_Amon_fullL / mc')
+print_the_outcome(some_return,'ocean_monthly_gn / sos')
+if some_return != 0:
+    print('didnt pass ocean-file test number 1... exit.')
+    sys.exit()
 
 
 
-# 4) SUCCEEDs (no longitude coordinate case)
-# atmos, AERmonZ / ta
-# just like #1, but lack longitude
-testfile_atmos_gr1_AERmonZ_nolons = \
-    '/arch0/cm6/ESM4/DECK/ESM4_historical_D1/gfdl.ncrc4-intel16-prod-openmp/' + \
-    'pp/atmos_plev39_cmip/ts/monthly/5yr/zonavg/' + \
-    'atmos_plev39_cmip.201001-201412.ta.nc'
+# 7) FAIL (copy_nc failure!!! WEIRD)
+# ocean, Omon / so
+# Result - identical failure to #6
+testfile_ocean_monthly_z_1x1deg_gr = \
+    '/archive/ejs/CMIP7/ESM4/DEV/ESM4.5v01_om5b04_piC/gfdl.ncrc5-intel23-prod-openmp/' + \
+    'pp/ocean_monthly_z_1x1deg/ts/monthly/5yr/' + \
+    'ocean_monthly_z_1x1deg.000101-000512.so.nc'
 try:
-    some_return = run_cmor_RUN(testfile_atmos_gr1_AERmonZ_nolons, 'AERmonZ', opt_var_name = 'ta')
+    some_return = run_cmor_RUN(testfile_ocean_monthly_z_1x1deg_gr, 'Omon', opt_var_name = 'so')
 except Exception as exc:
     print(f'exception caught: exc=\n{exc}')
     some_return=-1    
     pass
-print_the_outcome(some_return,'atmos_gr1_AERmonZ_nolons / ta')
-
-
-# 5) SUCCEEDs
-# ocean, Omon / sos
-testfile_ocean_monthly_1x1deg_gr = \
-    '/arch0/cm6/ESM4/DECK/ESM4_historical_D1/gfdl.ncrc4-intel16-prod-openmp/' + \
-    'pp/ocean_monthly_1x1deg/ts/monthly/5yr/' + \
-    'ocean_monthly_1x1deg.190001-190412.sos.nc'
-try:
-    some_return = run_cmor_RUN(testfile_ocean_monthly_1x1deg_gr, 'Omon', opt_var_name = 'sos')
-except Exception as exc:
-    print(f'exception caught: exc=\n{exc}')
-    some_return=-1    
-    pass
-print_the_outcome(some_return,'ocean_monthly_1x1deg_gr / sos')
-
-
-
-## 6) FAIL (copy_nc failure!!! WEIRD)
+print_the_outcome(some_return,'ocean_monthly_z_1x1deg_gr / so')
+if some_return != 0:
+    print('didnt pass ocean-file test number 2... exit.')
+    sys.exit()
+
+
+## 1) SUCCEEDs
+## land, Lmon, gr1
+#testfile_land_gr1_Lmon = \
+#    '/archive/Eric.Stofferahn/CMIP7/ESM4/DEV/ESM4.5v01_om5b04_piC/gfdl.ncrc5-intel23-prod-openmp/' + \
+#    'pp/land/ts/monthly/5yr/' + \
+#    'land.005101-005512.lai.nc'
+#try:
+#    some_return = run_cmor_RUN(testfile_land_gr1_Lmon, 'Lmon', opt_var_name = 'lai')
+#except:
+#    print(f'exception caught: exc=\n{exc}')
+#    some_return=-1
+#    pass
+#print_the_outcome(some_return,'land_gr1_Lmon / lai')
+#
+#
+## 2) SUCCEEDs
+## atmos, Amon / cl
+#testfile_atmos_level_cmip_gr1_Amon_complex_vert = \
+#    '/arch0/cm6/ESM4/DECK/ESM4_historical_D1/gfdl.ncrc4-intel16-prod-openmp/' + \
+#    'pp/atmos_level_cmip/ts/monthly/5yr/' + \
+#    'atmos_level_cmip.196001-196412.cl.nc'
+#try:
+#    some_return = run_cmor_RUN(testfile_atmos_level_cmip_gr1_Amon_complex_vert, 'Amon', opt_var_name = 'cl')
+#except Exception as exc:
+#    print(f'exception caught: exc=\n{exc}')
+#    some_return=-1    
+#    pass
+#print_the_outcome(some_return,'atmos_level_cmip_gr1_Amon_complex_vert / cl')
+#
+#
+## 3) SUCCEEDs
+## atmos, Amon / mc
+#testfile_atmos_level_cmip_gr1_Amon_fullL = \
+#    '/arch0/cm6/ESM4/DECK/ESM4_historical_D1/gfdl.ncrc4-intel16-prod-openmp/' + \
+#    'pp/atmos_level_cmip/ts/monthly/5yr/' + \
+#    'atmos_level_cmip.195501-195912.mc.nc'
+#try:
+#    some_return = run_cmor_RUN(testfile_atmos_level_cmip_gr1_Amon_fullL, 'Amon', opt_var_name = 'mc')
+#except Exception as exc:
+#    print(f'exception caught: exc=\n{exc}')
+#    some_return=-1    
+#    pass
+#print_the_outcome(some_return,'atmos_level_cmip_gr1_Amon_fullL / mc')
+#
+#
+#
+## 4) SUCCEEDs (no longitude coordinate case)
+## atmos, AERmonZ / ta
+## just like #1, but lack longitude
+#testfile_atmos_gr1_AERmonZ_nolons = \
+#    '/arch0/cm6/ESM4/DECK/ESM4_historical_D1/gfdl.ncrc4-intel16-prod-openmp/' + \
+#    'pp/atmos_plev39_cmip/ts/monthly/5yr/zonavg/' + \
+#    'atmos_plev39_cmip.201001-201412.ta.nc'
+#try:
+#    some_return = run_cmor_RUN(testfile_atmos_gr1_AERmonZ_nolons, 'AERmonZ', opt_var_name = 'ta')
+#except Exception as exc:
+#    print(f'exception caught: exc=\n{exc}')
+#    some_return=-1    
+#    pass
+#print_the_outcome(some_return,'atmos_gr1_AERmonZ_nolons / ta')
+#
+#
+## 5) SUCCEEDs
 ## ocean, Omon / sos
-## Result - error, AttributeError: NetCDF: Attempt to define fill value when data already exists.
-#testfile_ocean_monthly_gn = \
-#    '/archive/ejs/CMIP7/ESM4/DEV/ESM4.5v01_om5b04_piC/gfdl.ncrc5-intel23-prod-openmp/' + \
-#    'pp/ocean_monthly/ts/monthly/5yr/' + \
-#    'ocean_monthly.002101-002512.sos.nc'
+#testfile_ocean_monthly_1x1deg_gr = \
+#    '/arch0/cm6/ESM4/DECK/ESM4_historical_D1/gfdl.ncrc4-intel16-prod-openmp/' + \
+#    'pp/ocean_monthly_1x1deg/ts/monthly/5yr/' + \
+#    'ocean_monthly_1x1deg.190001-190412.sos.nc'
 #try:
-#    some_return = run_cmor_RUN(testfile_ocean_monthly_gn, 'Omon', opt_var_name = 'sos')
+#    some_return = run_cmor_RUN(testfile_ocean_monthly_1x1deg_gr, 'Omon', opt_var_name = 'sos')
 #except Exception as exc:
 #    print(f'exception caught: exc=\n{exc}')
 #    some_return=-1    
 #    pass
-#print_the_outcome(some_return,'ocean_monthly_gn / sos')
-
-
-
-## 7) FAIL (copy_nc failure!!! WEIRD)
-## ocean, Omon / so
-## Result - identical failure to #6
-#testfile_ocean_monthly_z_1x1deg_gr = \
-#    '/archive/ejs/CMIP7/ESM4/DEV/ESM4.5v01_om5b04_piC/gfdl.ncrc5-intel23-prod-openmp/' + \
-#    'pp/ocean_monthly_z_1x1deg/ts/monthly/5yr/' + \
-#    'ocean_monthly_z_1x1deg.000101-000512.so.nc'
+#print_the_outcome(some_return,'ocean_monthly_1x1deg_gr / sos')
+#
+#
+#
+#
+## 8) SUCCEEDs (no latitude, nor longitude, nor vertical coordinates cases)
+## atmos, Amon / ch4global
+#testfile_atmos_scalar_gn_Amon_nolon_nolat = \
+#    '/arch0/cm6/ESM4/DECK/ESM4_historical_D1/gfdl.ncrc4-intel16-prod-openmp/' + \
+#    'pp/atmos_scalar/ts/monthly/5yr/' + \
+#    'atmos_scalar.197001-197412.ch4global.nc'
 #try:
-#    some_return = run_cmor_RUN(testfile_ocean_monthly_z_1x1deg_gr, 'Omon', opt_var_name = 'so')
+#    some_return = run_cmor_RUN(testfile_atmos_scalar_gn_Amon_nolon_nolat, 'Amon', opt_var_name = 'ch4global')
 #except Exception as exc:
 #    print(f'exception caught: exc=\n{exc}')
 #    some_return=-1    
 #    pass
-#print_the_outcome(some_return,'ocean_monthly_z_1x1deg_gr / so')
+#print_the_outcome(some_return,'atmos_scalar_gn_Amon_nolon_nolat / ch4global')
+
+
 
 
-# 8) SUCCEEDs (no latitude, nor longitude, nor vertical coordinates cases)
-# atmos, Amon / ch4global
-testfile_atmos_scalar_gn_Amon_nolon_nolat = \
+
+# 9) FAIL (4 dimensional data with no vertical) 
+# Result - error,
+# the variable gppLut needs coordinate variables time lat lon and landuse
+# the landuse coordinate is expected to be of character type, and one of four different specific strings,
+# each string representing primary/secondary, pasture, crops, urban style land usage.
+# this file's landuse coordinate is an integer between 0 and 3, so it's not clear to the CMOR module
+# how to map the integers to the string values (though it's obvious to me)
+testfile_LUmip_refined_gr1_Emon_landusedim = \
     '/arch0/cm6/ESM4/DECK/ESM4_historical_D1/gfdl.ncrc4-intel16-prod-openmp/' + \
-    'pp/atmos_scalar/ts/monthly/5yr/' + \
-    'atmos_scalar.197001-197412.ch4global.nc'
+    'pp/LUmip_refined/ts/monthly/5yr/' + \
+    'LUmip_refined.185001-185412.gppLut.nc'
 try:
-    some_return = run_cmor_RUN(testfile_atmos_scalar_gn_Amon_nolon_nolat, 'Amon', opt_var_name = 'ch4global')
+    some_return = run_cmor_RUN(testfile_LUmip_refined_gr1_Emon_landusedim, 'Emon', opt_var_name = 'gppLut')
 except Exception as exc:
     print(f'exception caught: exc=\n{exc}')
     some_return=-1    
     pass
-print_the_outcome(some_return,'atmos_scalar_gn_Amon_nolon_nolat / ch4global')
-
-
-
+print_the_outcome(some_return,'LUmip_refined_gr1_Emon_langusedim / gppLut')
+if some_return != 0:
+    print('didnt pass the land-file test. exit.')
+    sys.exit()