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Address BMI header issues impeding other work #140

Address BMI header issues impeding other work

Address BMI header issues impeding other work #140

# Test changes that have been pushed to the master branch
name: Testing and Validation
# Controls when the action will run.
on:
push:
branches: [ master ]
pull_request:
branches: [ master ]
workflow_dispatch:
#env:
# Obtained from https://docs.github.com/en/actions/using-github-hosted-runners/about-github-hosted-runners#supported-runners-and-hardware-resources
# TODO: add something later that can check the runners for hyperthreading
#LINUX_NUM_PROC_CORES: 2
#MACOS_NUM_PROC_CORES: 3
# A workflow run is made up of one or more jobs that can run sequentially or in parallel
jobs:
# Run general unit tests in linux environment
test_unit:
# The type of runner that the job will run on
strategy:
matrix:
os: [ubuntu-latest, macos-latest]
fail-fast: false
runs-on: ${{ matrix.os }}
# Steps represent a sequence of tasks that will be executed as part of the job
steps:
- name: Checkout the commit
uses: actions/checkout@v2
- name: Build and Run Standalone BASE option
run: |
mkdir build && cd build
cmake ../ -DBASE=ON
make
cd ..
./run_cfe.sh BASE
- name: Build and Run Standalone FORCING option
run: |
git submodule update --init
cd build
cmake ../ -DFORCING=ON
make
cd ..
./run_cfe.sh FORCING
- name: Build and Run Standalone PET option
run: |
git submodule update --init
cd build
cmake ../ -DFORCINGPET=ON
make
cd ..
./run_cfe.sh FORCINGPET
- name : Build and Run AETROOTZONE option
run: |
git clone https://github.com/NOAA-OWP/SoilMoistureProfiles extern/SoilMoistureProfiles
cd build
cmake ../ -DAETROOTZONE=ON
make
cd ..
./run_cfe.sh AETROOTZONE
- name: Build and Run BMI Unit Test
run: |
cd build
cmake ../ -DUNITTEST=ON
make
cd ..
cd test
./run_unittest.sh