Fixing links in documentation

OHDSI · Jan 9, 2025 · 231bc49 · 231bc49
1 parent e619b0d
commit 231bc49
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Showing 87 changed files with 72 additions and 84 deletions.
diff --git a/NAMESPACE b/NAMESPACE
@@ -1,9 +1,19 @@
 # Generated by roxygen2: do not edit by hand
 
+S3method(compileReconnectCode,DatabaseConnectorDbiConnection)
+S3method(compileReconnectCode,default)
 S3method(disconnect,DatabaseConnectorDbiConnection)
 S3method(disconnect,default)
+S3method(getCatalogs,DatabaseConnectorDbiConnection)
+S3method(getCatalogs,default)
+S3method(getSchemaNames,DatabaseConnectorDbiConnection)
+S3method(getSchemaNames,default)
+S3method(getServer,DatabaseConnectorDbiConnection)
+S3method(getServer,default)
 S3method(insertTable,DatabaseConnectorDbiConnection)
 S3method(insertTable,default)
+S3method(listDatabaseConnectorColumns,DatabaseConnectorDbiConnection)
+S3method(listDatabaseConnectorColumns,default)
 S3method(lowLevelExecuteSql,DatabaseConnectorDbiConnection)
 S3method(lowLevelExecuteSql,default)
 S3method(lowLevelQuerySql,DatabaseConnectorDbiConnection)

diff --git a/R/DatabaseConnector.R b/R/DatabaseConnector.R
@@ -68,7 +68,7 @@ NULL
 #'
 #' # Impala
 #' 
-#' Go to [Cloudera's site](https://www.cloudera.com/downloads/connectors/impala/jdbc/2-5-5.html), pick
+#' Go to [Cloudera's site](https://www.cloudera.com/downloads/connectors/impala/jdbc.html), pick
 #' your OS version, and click "GET IT NOW!'. Register, and you should be able to download the driver.
 #'
 #' # SQLite

diff --git a/R/RStudio.R b/R/RStudio.R
@@ -87,6 +87,7 @@ listDatabaseConnectorColumns <- function(connection,
   UseMethod("listDatabaseConnectorColumns", connection)
 }
 
+#' @exportS3Method
 listDatabaseConnectorColumns.default <- function(connection,
                                                  catalog = NULL,
                                                  schema = NULL,
@@ -136,6 +137,7 @@ listDatabaseConnectorColumns.default <- function(connection,
   return(data.frame(name = fields, type = types, stringsAsFactors = FALSE))
 }
 
+#' @exportS3Method
 listDatabaseConnectorColumns.DatabaseConnectorDbiConnection <- function(connection,
                                                                         catalog = NULL,
                                                                         schema = NULL,
@@ -220,6 +222,7 @@ getServer <- function(connection) {
   UseMethod("getServer", connection)
 }
 
+#' @exportS3Method
 getServer.default <- function(connection) {
   if (dbms(connection) == "hive") {
     url <- connection@url
@@ -235,6 +238,7 @@ getServer.default <- function(connection) {
   return(server)
 }
 
+#' @exportS3Method
 getServer.DatabaseConnectorDbiConnection <- function(connection) {
   return(connection@server)
 }
@@ -243,6 +247,7 @@ compileReconnectCode <- function(connection) {
   UseMethod("compileReconnectCode", connection)
 }
 
+#' @exportS3Method
 compileReconnectCode.default <- function(connection) {
   databaseMetaData <- rJava::.jcall(
     connection@jConnection,
@@ -265,6 +270,7 @@ compileReconnectCode.default <- function(connection) {
   return(code)
 }
 
+#' @exportS3Method
 compileReconnectCode.DatabaseConnectorDbiConnection <- function(connection) {
   code <- sprintf(
     "library(DatabaseConnector)\ncon <- connect(dbms = \"%s\", server = \"%s\")",
@@ -278,6 +284,7 @@ getSchemaNames <- function(conn, catalog = NULL) {
   UseMethod("getSchemaNames", conn)
 }
 
+#' @exportS3Method
 getSchemaNames.default <- function(conn, catalog = NULL) {
   if (is.null(catalog)) {
     catalog <- rJava::.jnull("java/lang/String")
@@ -301,6 +308,7 @@ getSchemaNames.default <- function(conn, catalog = NULL) {
   return(schemas)
 }
 
+#' @exportS3Method
 getSchemaNames.DatabaseConnectorDbiConnection <- function(conn, catalog = NULL) {
   if (dbms(conn) %in% c("sqlite", "sqlite extended")) {
     return("main")
@@ -319,6 +327,7 @@ getCatalogs <- function(connection) {
   UseMethod("getCatalogs", connection)
 }
 
+#' @exportS3Method
 getCatalogs.default <- function(connection) {
   metaData <- rJava::.jcall(connection@jConnection, "Ljava/sql/DatabaseMetaData;", "getMetaData")
   resultSet <- rJava::.jcall(metaData, "Ljava/sql/ResultSet;", "getCatalogs")
@@ -331,6 +340,7 @@ getCatalogs.default <- function(connection) {
   return(catalogs)
 }
 
+#' @exportS3Method
 getCatalogs.DatabaseConnectorDbiConnection <- function(connection) {
   if (connection@dbms == "duckdb") {
     sql <- "

diff --git a/docs/articles/Connecting.html b/docs/articles/Connecting.html
diff --git a/docs/articles/DbiAndDbplyr.html b/docs/articles/DbiAndDbplyr.html
diff --git a/docs/articles/Querying.html b/docs/articles/Querying.html
diff --git a/docs/pkgdown.yml b/docs/pkgdown.yml
@@ -5,4 +5,4 @@ articles:
   Connecting: Connecting.html
   DbiAndDbplyr: DbiAndDbplyr.html
   Querying: Querying.html
-last_built: 2025-01-08T10:16Z
+last_built: 2025-01-09T07:21Z
diff --git a/docs/reference/computeDataHash.html b/docs/reference/computeDataHash.html
diff --git a/docs/reference/connect.html b/docs/reference/connect.html
diff --git a/docs/reference/createConnectionDetails.html b/docs/reference/createConnectionDetails.html
diff --git a/docs/reference/dbms.html b/docs/reference/dbms.html
diff --git a/docs/reference/disconnect.html b/docs/reference/disconnect.html
diff --git a/docs/reference/dropEmulatedTempTables.html b/docs/reference/dropEmulatedTempTables.html
diff --git a/docs/reference/executeSql.html b/docs/reference/executeSql.html
diff --git a/docs/reference/existsTable.html b/docs/reference/existsTable.html
diff --git a/docs/reference/extractQueryTimes.html b/docs/reference/extractQueryTimes.html
diff --git a/docs/reference/getTableNames.html b/docs/reference/getTableNames.html
diff --git a/docs/reference/insertTable.html b/docs/reference/insertTable.html
diff --git a/docs/reference/jdbcDrivers.html b/docs/reference/jdbcDrivers.html
diff --git a/docs/reference/lowLevelExecuteSql.html b/docs/reference/lowLevelExecuteSql.html
diff --git a/docs/reference/lowLevelQuerySql.html b/docs/reference/lowLevelQuerySql.html
diff --git a/docs/reference/lowLevelQuerySqlToAndromeda.html b/docs/reference/lowLevelQuerySqlToAndromeda.html
diff --git a/docs/reference/querySql.html b/docs/reference/querySql.html
diff --git a/docs/reference/querySqlToAndromeda.html b/docs/reference/querySqlToAndromeda.html
diff --git a/docs/reference/renderTranslateExecuteSql.html b/docs/reference/renderTranslateExecuteSql.html
diff --git a/docs/reference/renderTranslateQueryApplyBatched.html b/docs/reference/renderTranslateQueryApplyBatched.html