🧑‍🔧 [Padawan contrib] Updating and aligning dependencies

.pre-commit-config.yaml

@@ -1,6 +1,6 @@
 repos:
   - repo: https://github.com/pre-commit/pre-commit-hooks
-    rev: v4.5.0
+    rev: v4.6.0
     hooks:
       - id: check-ast
         always_run: true
@@ -80,7 +80,7 @@ repos:
 
   - repo: https://github.com/astral-sh/ruff-pre-commit
     # Ruff version.
-    rev: "v0.4.7"
+    rev: "v0.6.2"
     hooks:
       - id: ruff
         args: [--fix, --exit-non-zero-on-fix, --show-fixes]
@@ -89,7 +89,7 @@ repos:
         types_or: [python, pyi, jupyter]
 
   - repo: https://github.com/pre-commit/mirrors-mypy
-    rev: v1.10.0
+    rev: v1.10.1
     hooks:
       - id: mypy
         name: "mypy: syft-cli"
@@ -114,7 +114,7 @@ repos:
           ]
 
   - repo: https://github.com/pre-commit/mirrors-mypy
-    rev: v1.10.0
+    rev: v1.10.1
     hooks:
       - id: mypy
         name: "mypy: grid"
@@ -139,7 +139,7 @@ repos:
           ]
 
   - repo: https://github.com/pre-commit/mirrors-mypy
-    rev: v1.10.0
+    rev: v1.10.1
     hooks:
       - id: mypy
         name: "mypy: syft"

docs/requirements.txt

@@ -5,9 +5,9 @@ jinja2>=3.1.4 # not directly required, pinned by Snyk to avoid a vulnerability
 markupsafe==2.0.1
 pydata-sphinx-theme==0.7.2
 pygments>=2.15.0 # not directly required, pinned by Snyk to avoid a vulnerability
-requests>=2.32.2 # not directly required, pinned by Snyk to avoid a vulnerability
-setuptools>=70.0.0 # not directly required, pinned by Snyk to avoid a vulnerability
-sphinx==4.3.0
+requests>=2.32.3 # not directly required, pinned by Snyk to avoid a vulnerability
+setuptools>=74.0.0 # not directly required, pinned by Snyk to avoid a vulnerability
+sphinx==4.5.0
 sphinx-autoapi==1.8.4
 sphinx-code-include==1.1.1
 sphinx-copybutton==0.4.0

packages/grid/backend/backend.dockerfile

@@ -1,6 +1,6 @@
 ARG PYTHON_VERSION="3.12"
-ARG UV_VERSION="0.2.13-r0"
-ARG TORCH_VERSION="2.2.2"
+ARG UV_VERSION="0.3.5-r0"
+ARG TORCH_VERSION="2.4.0"
 
 # wolfi-os pkg definition links
 # https://github.com/wolfi-dev/os/blob/main/python-3.12.yaml

packages/grid/enclave/attestation/requirements.txt

@@ -1,3 +1,3 @@
-fastapi==0.110.0
+fastapi==0.112.2
 loguru==0.7.2
-uvicorn[standard]==0.27.1
+uvicorn[standard]==0.30.6

packages/grid/seaweedfs/requirements.txt

@@ -1,4 +1,4 @@
-fastapi==0.110.0
+fastapi==0.112.2
 pyyaml==6.0.1
 supervisor==4.2.5
-uvicorn==0.27.1
+uvicorn==0.30.6

packages/grid/seaweedfs/seaweedfs.dockerfile

@@ -1,4 +1,4 @@
-ARG SEAWEEDFS_VERSION="3.64"
+ARG SEAWEEDFS_VERSION="3.71"
 FROM chrislusf/seaweedfs:${SEAWEEDFS_VERSION}_large_disk
 
 WORKDIR /root/swfs

packages/grid/syft-client/syft.Dockerfile

@@ -17,7 +17,7 @@ RUN apk update && apk upgrade && \
 COPY ./syft /tmp/syft
 
 RUN --mount=type=cache,target=/root/.cache,sharing=locked \
-    pip install --user jupyterlab==4.2.2 /tmp/syft
+    pip install --user jupyterlab==4.2.4 /tmp/syft
 
 # ==================== [Final] Setup Syft Client ==================== #
 

packages/syft/setup.cfg

@@ -26,7 +26,7 @@ package_dir =
 # Add here dependencies of your project (semicolon/line-separated), e.g.
 
 syft =
-    setuptools
+    setuptools>=74.0.0
     bcrypt==4.1.2
     boto3==1.34.56
     forbiddenfruit==0.1.4
@@ -39,13 +39,13 @@ syft =
     pyzmq>=23.2.1,<=25.1.1
     requests==2.32.3
     RestrictedPython==7.0
-    tqdm==4.66.4
+    tqdm==4.66.5
     typeguard==4.1.5
-    typing_extensions==4.12.0
+    typing_extensions==4.12.2
     sherlock[filelock]==0.4.1
-    uvicorn[standard]==0.30.0
+    uvicorn[standard]==0.30.6
     markdown==3.5.2
-    fastapi==0.111.0
+    fastapi==0.112.2
     psutil==6.0.0
     itables==1.7.1
     argon2-cffi==23.1.0
@@ -56,8 +56,8 @@ syft =
     pandas==2.2.2
     docker==7.1.0
     kr8s==0.13.5
-    PyYAML==6.0.1
-    azure-storage-blob==12.19.1
+    PyYAML==6.0.2
+    azure-storage-blob==12.22.0
     ipywidgets==8.1.2
     tomli==2.0.1  # Later for python 3.11 > we can just use tomlib that comes with python
     tomli_w==1.0.0
@@ -87,23 +87,23 @@ exclude =
 
 [options.extras_require]
 data_science =
-    transformers==4.41.2
-    opendp==0.9.2
+    transformers==4.44.0
+    opendp==0.11.0
     evaluate==0.4.2
     recordlinkage==0.16
     # backend.dockerfile installs torch separately, so update the version over there as well!
-    torch==2.2.2
+    torch==2.4.0
 
 dev =
     %(test_plugins)s
     %(telemetry)s
-    bandit==1.7.8
-    debugpy==1.8.2
-    importlib-metadata==7.1.0
+    bandit==1.7.9
+    debugpy==1.8.5
+    importlib-metadata==8.2.0
     isort==5.13.2
-    mypy==1.10.0
-    pre-commit==3.7.1
-    ruff==0.4.7
+    mypy==1.10.1
+    pre-commit==3.8.0
+    ruff==0.6.2
     safety>=2.4.0b2
     aiosmtpd==1.4.6
 

packages/syftcli/setup.py

@@ -7,13 +7,13 @@
 packages = [
     "requests==2.32.3",
     "pyyaml==6.0.1",
-    "packaging==21.3",
-    "typer[all]==0.9.0",
-    "typing_extensions==4.6.3",
+    "packaging==24.1",
+    "typer[all]==0.12.3",
+    "typing_extensions==4.12.2",
 ]
 
 build_packages = [
-    "pyinstaller==5.13.0",
+    "pyinstaller==6.10.0",
 ]
 
 dev_packages = ["pytest"] + build_packages

ruff.toml

@@ -20,6 +20,7 @@ select = [
 ignore = [
     "B904",  # check for raise statements in exception handlers that lack a from clause
     "B905",  # zip() without an explicit strict= parameter
+    "E721",
 ]
 
 [lint.per-file-ignores]