Revert "Merge pull request GEO-BON#177 from GEO-BON/loadFromStac_resa…

…mpling"

This reverts commit 703ddc7, reversing
changes made to 114470c.

pipelines/SDM/SDM_maxEnt.json

@@ -417,8 +417,8 @@
       "id": "119",
       "type": "io",
       "position": {
-        "x": 514.7177806924453,
-        "y": 273.83554287387864
+        "x": 521.7177806924453,
+        "y": 279.83554287387864
       },
       "data": {
         "descriptionFile": "data>loadFromStac.yml"
@@ -548,8 +548,6 @@
           "q3"
         ]
       }
-<<<<<<< HEAD
-=======
     },
     {
       "id": "132",
@@ -570,7 +568,6 @@
           "median"
         ]
       }
->>>>>>> main
     }
   ],
   "edges": [
@@ -937,16 +934,13 @@
       "target": "119",
       "targetHandle": "resampling",
       "id": "reactflow__edge-131-119resampling"
-<<<<<<< HEAD
-=======
     },
     {
       "source": "132",
       "sourceHandle": null,
       "target": "119",
       "targetHandle": "aggregation",
       "id": "reactflow__edge-132-119aggregation"
->>>>>>> main
     }
   ],
   "inputs": {

scripts/data/loadFromStac.R

@@ -40,6 +40,11 @@ if("resampling" %in% names(input)){
   resampling="near"
 }
 
+if("aggregation" %in% names(input)){
+  aggregation=input$aggregation
+}else{
+  aggregation="first"
+}
 
 if("taxa" %in% names(input)){ #EXTRACT GBIF HEATMAPS
   collections_items <- paste0("gbif_heatmaps|", input$taxa, "-heatmap")
@@ -71,7 +76,7 @@ cube_args <- list(stac_path = input$stac_url,
   t1 = NULL,
   spatial.res = input$spatial_res, # in meters
   temporal.res = "P1D",
-  aggregation = "first",
+  aggregation = aggregation,
   resampling = resampling)
 
 proj <- input$proj

scripts/data/loadFromStacFun.R

@@ -12,7 +12,7 @@ load_cube <-
            t1 =  format(lubridate::as_datetime('2200-01-01'), "%Y-%m-%dT%H:%M:%SZ"),
            spatial.res = NULL,
            temporal.res = "P1Y",
-           aggregation = "first",
+           aggregation = "mean",
            resampling = "near") {
     s <- rstac::stac(stac_path)
     if (!inherits(bbox, "bbox"))