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pyproject.toml
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pyproject.toml
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[build-system]
build-backend = "setuptools.build_meta"
requires = ["setuptools>=67.8.0", "wheel>=0.40.0"]
[project]
name = "janis-pipelines.core"
version = "v0.13.1"
description = "Workflow language + translation utilities to convert workflows from one language to another"
readme = "README.md"
license = { file = "LICENSE" }
keywords = [
"janis",
"workflows",
"pipelines",
"translation",
"galaxy",
"nextflow",
"cwl",
"wdl",
"bioinformatics",
]
authors = [
{ name = "Michael Franklin", email = "[email protected]" },
{ name = "Grace Hall", email = "[email protected]" },
{ name = "Richard Lupat", email = "[email protected]" },
{ name = "Evan Thomas", email = "[email protected]" },
{ name = "Mohammad Bhuyan", email = "[email protected]" },
]
maintainers = [
{ name = "Grace Hall", email = "[email protected]" },
{ name = "Richard Lupat", email = "[email protected]" },
]
classifiers = [
"Development Status :: 2 - Pre-Alpha",
"Intended Audience :: Developers",
"Intended Audience :: Science/Research",
"Topic :: Scientific/Engineering",
"Topic :: Scientific/Engineering :: Bio-Informatics",
]
dependencies = [
"importlib-metadata==4.12.0",
"illusional-wdlgen",
"ruamel.yaml >= 0.12.4, <= 0.16.5",
"regex",
"tabulate",
"path",
"galaxy-app==22.1.1",
"galaxy-auth==22.1.1",
"galaxy-config==22.1.1",
"galaxy-containers==22.1.1",
"galaxy-data==22.1.1",
"galaxy-files==22.1.1",
"galaxy-job-execution==22.1.1",
"galaxy-job-metrics==22.1.1",
"galaxy-objectstore==22.1.1",
"galaxy-sequence-utils==1.1.5",
"galaxy-tool-util==22.1.2",
"galaxy-util==22.1.1",
"galaxy-web-framework==22.1.1",
"galaxy-web-stack==22.1.1",
"pulsar-galaxy-lib==0.14.13",
"packaging==21.3",
"miniwdl",
"biopython==1.79",
"filelock==3.7.0",
"cwlformat==2020.5.19",
"cwl-utils==0.15",
"graphviz",
"nose",
"pydantic<2"
]
requires-python = ">=3.10.5"
[project.urls]
repository = "https://github.com/PMCC-BioinformaticsCore/janis-core"
documentation = "https://janis.readthedocs.io/en/latest/"
[tool.setuptools]
include-package-data = true
[tool.setuptools.package-data]
janis_core = [
"messages/*.yaml",
"ingestion/data/*.json",
"ingestion/data/*.yaml",
"ingestion/data/galaxy/*.json",
"ingestion/data/galaxy/*.yaml",
"ingestion/data/galaxy/*.xml.sample",
]
[tool.setuptools.packages.find]
where = ["./"]
include = ["janis_core*"]
namespaces = false