updated build script to delete temp files #17
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| name: Build-upload-docker | |
| defaults: | |
| run: | |
| working-directory: ./ | |
| on: | |
| push: | |
| branches: | |
| - '**' | |
| paths: | |
| - build_script.py | |
| - .github/ | |
| - zfBmd/ | |
| - zfExp/ | |
| - sampleChemMapping/ | |
| - dbSchema/ | |
| - exposome/ | |
| workflow_dispatch: | |
| jobs: | |
| build-and-push-sample: | |
| runs-on: ubuntu-latest | |
| steps: | |
| - name: Checkout | |
| uses: actions/checkout@v3 | |
| - name: Set up Docker Buildx | |
| uses: docker/setup-buildx-action@v3 | |
| - name: Login to DockerHub | |
| uses: docker/login-action@v2 | |
| with: | |
| username: ${{ secrets.DOCKERHUB_USERNAME }} | |
| password: ${{ secrets.DOCKERHUB_PASSWORD }} | |
| - name: Build and push sampleChem | |
| uses: docker/build-push-action@v3 | |
| with: | |
| file: sampleChemMapping/Dockerfile | |
| tags: sgosline/srp-samplechem:latest | |
| push: true | |
| build-push-expo: | |
| runs-on: ubuntu-latest | |
| steps: | |
| - name: Checkout | |
| uses: actions/checkout@v3 | |
| - name: Set up Docker Buildx | |
| uses: docker/setup-buildx-action@v3 | |
| - name: Login to DockerHub | |
| uses: docker/login-action@v2 | |
| with: | |
| username: ${{ secrets.DOCKERHUB_USERNAME }} | |
| password: ${{ secrets.DOCKERHUB_PASSWORD }} | |
| - name: Build and push expo | |
| uses: docker/build-push-action@v3 | |
| with: | |
| file: exposome/Dockerfile | |
| tags: sgosline/srp-exposome:latest | |
| push: true | |
| build-push-db: | |
| runs-on: ubuntu-latest | |
| steps: | |
| - name: Checkout | |
| uses: actions/checkout@v3 | |
| - name: Set up Docker Buildx | |
| uses: docker/setup-buildx-action@v3 | |
| - name: Login to DockerHub | |
| uses: docker/login-action@v2 | |
| with: | |
| username: ${{ secrets.DOCKERHUB_USERNAME }} | |
| password: ${{ secrets.DOCKERHUB_PASSWORD }} | |
| - name: Build and push dbschema | |
| uses: docker/build-push-action@v3 | |
| with: | |
| file: dbSchema/Dockerfile | |
| tags: sgosline/srp-dbschema:latest | |
| push: true | |
| build-push-exp: | |
| runs-on: ubuntu-latest | |
| steps: | |
| - name: Checkout | |
| uses: actions/checkout@v3 | |
| - name: Set up Docker Buildx | |
| uses: docker/setup-buildx-action@v3 | |
| - name: Login to DockerHub | |
| uses: docker/login-action@v2 | |
| with: | |
| username: ${{ secrets.DOCKERHUB_USERNAME }} | |
| password: ${{ secrets.DOCKERHUB_PASSWORD }} | |
| - name: Build and push expr | |
| uses: docker/build-push-action@v3 | |
| with: | |
| file: zfExp/Dockerfile | |
| push: true | |
| tags: sgosline/srp-zfexp | |
| # - name: Build and push bmd | |
| # uses: docker/build-push-action@v6 | |
| # with: | |
| # context: zfBmd | |
| # push: true | |
| # tags: sgosline/srp-zfbmd:latest | |
| # platforms: linux/amd64,linux/arm64 | |
| # - name: Build and push bmd2Samps | |
| # uses: docker/build-push-action@v6 | |
| # with: | |
| # context: old/bmd2Samps | |
| # push: true | |
| # tags: sgosline/srp-bmd2samps:v1 | |
| # platforms: linux/amd64,linux/arm64 | |
| # - name: Build and push version 2 bmd2Samps | |
| # uses: docker/build-push-action@v6 | |
| # with: | |
| # context: old/bmd2Samps_v2 | |
| # push: true | |
| # tags: sgosline/srp-bmd2samps:latest | |
| # platforms: linux/amd64,linux/arm64 |