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put regional date setting back in workflow #45

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merged 17 commits into from
Jun 5, 2024
Merged

put regional date setting back in workflow #45

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bcb5066
Add scenarios for WebApp comparison
HamishBrownPFR May 27, 2024
38cc568
Merge remote-tracking branch 'upstream/main' into SmallerFixes
HamishBrownPFR May 29, 2024
8f2e484
put regional date setting back in workflow
HamishBrownPFR May 30, 2024
235e763
Try adding culture info to output table
HamishBrownPFR May 30, 2024
4e3c128
remove time zone set in actions
HamishBrownPFR May 30, 2024
add568a
Update Moisture.py
JBris May 30, 2024
ca074fd
Update Moisture.py
JBris May 30, 2024
7084d4a
Add Observations into crop coefficients
HamishBrownPFR Jun 2, 2024
8ad4ce3
Merge branch 'SmallerFixes' into CropStageTests
HamishBrownPFR Jun 4, 2024
43af05d
Change excel interface so met data is obtained from source met files …
HamishBrownPFR Jun 4, 2024
b5f6717
Update testing file
HamishBrownPFR Jun 4, 2024
71922ff
Add test scenarios for parallel testing of web app
HamishBrownPFR Jun 4, 2024
d76e5ed
Add some more graphs for comparing observed data
HamishBrownPFR Jun 4, 2024
1f1024a
Update crop coefficients with SVS measured values
HamishBrownPFR Jun 5, 2024
5cbffbc
update to excel test file not committed prior
HamishBrownPFR Jun 5, 2024
f291550
Merge remote-tracking branch 'upstream/main' into CropStageTests
HamishBrownPFR Jun 5, 2024
edac1b4
update test values
HamishBrownPFR Jun 5, 2024
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26 changes: 10 additions & 16 deletions SVSModel.Excel/ExcelInterface.cs
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Expand Up @@ -10,6 +10,8 @@
using SVSModel.Models;
using static SVSModel.Configuration.Constants;
using static SVSModel.Configuration.InputCategories;
using System.Runtime.InteropServices.ComTypes;
using SVSModel;

namespace SVSModel.Excel
{
Expand Down Expand Up @@ -63,31 +65,23 @@ public static class MyFunctions //: IMyFunctions
/// <param name="testResults">2D array with dates in teh first column and soil N test results in the second</param>
/// <returns>Dictionary with parameter names as keys and parameter values as values</returns>
[ExcelFunction(Description = "Returns full N balance results")]
public static object[,] GetDailyNBalance(object[,] met, object[,] config, object[,] testResults, object[,] nApplied)
public static object[,] GetDailyNBalance(object[,] config, object[,] testResults, object[,] nApplied)
{
List<string> configErrors = Functions.ValidateConfig(config);

for (var r = 0; r < met.GetLength(0); r++)
if (configErrors.Count == 0)
{
for (var c = 0; c < met.GetLength(1); c++)
{
if (met[r, c].GetType() == typeof(ExcelDna.Integration.ExcelEmpty) ||
met[r, c].GetType() == typeof(ExcelDna.Integration.ExcelError))
met[r, c] = null;
}
}
var _config = new Config(Functions.dictMaker(config));

var startDate = _config.Prior.EstablishDate.AddDays(-1);
var endDate = _config.Following.HarvestDate.AddDays(2);
var weatherStation = _config.Field.WeatherStation;
MetDataDictionaries metData = ModelInterface.BuildMetDataDictionaries(startDate, endDate, weatherStation, false);

if (configErrors.Count == 0)
{
Dictionary<DateTime, double> _tt = Functions.dictMaker(met, "MeanT");
Dictionary<DateTime, double> _rain = Functions.dictMaker(met, "Rain");
Dictionary<DateTime, double> _pet = Functions.dictMaker(met, "MeanPET");
Dictionary<DateTime, double> _testResults = Functions.dictMaker(testResults, "Value");
Dictionary<DateTime, double> _nApplied = Functions.dictMaker(nApplied, "Amount");
var _config = new Config(Functions.dictMaker(config));

return Simulation.Simulation.SimulateField(_tt, _rain, _pet, _testResults, _nApplied, _config, Constants.InitialN);
return Simulation.Simulation.SimulateField(metData.MeanT, metData.Rain, metData.MeanPET, _testResults, _nApplied, _config, Constants.InitialN);
}
else
{
Expand Down
46 changes: 23 additions & 23 deletions SVSModel/Data/CropCoefficientTableFull.csv
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318 changes: 293 additions & 25 deletions SVSModel/Data/CropCoefficients.ipynb
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4 changes: 2 additions & 2 deletions TestComponents/Test.cs
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Expand Up @@ -42,7 +42,7 @@
}
else
{
root = Environment.GetEnvironmentVariable("GITHUB_WORKSPACE");

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path = Path.Join(root, "TestComponents", "TestSets");
}

Expand All @@ -63,7 +63,7 @@
foreach (string s in sets)
{
//Make config file in format that .NET DataTable is able to import
runPythonScript(root, Path.Join("TestGraphs", "MakeConfigs", $"{s}.py"));

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//Run each test
runTestSet(path, s);
//Make graphs associated with each test
Expand All @@ -85,11 +85,11 @@

var assembly = Assembly.GetExecutingAssembly();
string testConfig = "TestComponents.TestSets." + set + ".FieldConfigs.csv";
Stream configcsv = assembly.GetManifestResourceStream(testConfig);

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DataFrame allTests = DataFrame.LoadCsv(configcsv);

string fertData = "TestComponents.TestSets." + set + ".FertiliserData.csv";
Stream fertcsv = assembly.GetManifestResourceStream(fertData);

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DataFrame allFert = new DataFrame();
if (fertcsv != null)
{
Expand All @@ -100,7 +100,7 @@

foreach (DataFrameRow row in allTests.Rows)
{
Tests.Add(row[0].ToString());

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}
//Tests.Add("8-1Wheat");

Expand All @@ -117,9 +117,9 @@
Dictionary<System.DateTime, double> testResults = new Dictionary<System.DateTime, double>();
Dictionary<System.DateTime, double> nApplied = fertDict(test, allFert);

string weatherStation = allTests["WeatherStation"][testRow].ToString();

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bool actualWeather = weatherStation.Contains("Actual");

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MetDataDictionaries metData = ModelInterface.BuildMetDataDictionaries(_config.Prior.EstablishDate, _config.Following.HarvestDate.AddDays(1), weatherStation, actualWeather);

Expand All @@ -129,7 +129,7 @@
List<string> OutPutHeaders = new List<string>();
for (int i = 0; i < output.GetLength(1); i += 1)
{
OutPutHeaders.Add(output[0, i].ToString());

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if (i == 0)
{
columns[i] = new PrimitiveDataFrameColumn<System.DateTime>(output[0, i].ToString());
Expand Down Expand Up @@ -158,9 +158,9 @@
{
System.IO.Directory.CreateDirectory("OutputFiles");
}

CultureInfo cult = new CultureInfo("en-NZ");
DataFrame.SaveCsv(
newDataframe, Path.Join(path, set, "Outputs", $"{test}.csv")
newDataframe, Path.Join(path, set, "Outputs", $"{test}.csv"), cultureInfo: cult
);
}
}
Expand Down Expand Up @@ -284,7 +284,7 @@
if (Environment.GetEnvironmentVariable("GITHUB_WORKSPACE") != null)
{
//Need to parse date like this in GitHub
date = DateTime.ParseExact(row[1].ToString(), "d/MM/yyyy", CultureInfo.InvariantCulture);

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}
else
{
Expand All @@ -299,7 +299,7 @@
}
if (date == last) //If alread fertiliser added for that date add it to existing total
{
fert[last] += Double.Parse(row[2].ToString());

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}
else //add it to a new date
{
Expand Down
724 changes: 362 additions & 362 deletions TestComponents/TestSets/CropStage/Outputs/Onion.csv
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62 changes: 31 additions & 31 deletions TestComponents/TestSets/Location/Outputs/ashburton_Aut.csv
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Original file line number Diff line number Diff line change
Expand Up @@ -218,34 +218,34 @@ Date,SoilMineralN,UptakeN,ResidueN,SoilOMN,FertiliserN,CropN,ProductN,LostN,RSWC
29/08/2023 12:00:00 am,198.62619241421351,0,2.8057384024105403,0.50122957844414873,0,0,0,0,0.96675206611570252,0,0,0,0
30/08/2023 12:00:00 am,201.74336498286061,0,2.6115086858255694,0.50566388282151364,0,0,0,0,0.98806338592536946,0,0,0,0
31/08/2023 12:00:00 am,204.62695366417989,0,2.3872335557685034,0.49635512555077665,0,0,0,0,0.98409224836645959,0,0,0,0
1/09/2023 12:00:00 am,207.34783723028369,0,2.2209014587173925,0.4999821073864007,0,1.531620091597147,1.4011487504610938,0,0.97393944036503077,0,0,0.010258361860937579,1.531620091597147
2/09/2023 12:00:00 am,209.6951416913769,0.30335637448296215,2.1245951574914557,0.5260656780847297,0,1.8349764660801091,1.6786636560066184,0,0.97357814418361355,0,0,0.016085510208408746,1.8349764660801091
3/09/2023 12:00:00 am,211.81792361880906,0.36213210288701014,1.9595993623894543,0.5253146679297056,0,2.1971085689671193,2.0099474686476984,0,0.97007724119139671,0,0,0.025121219147158948,2.1971085689671193
4/09/2023 12:00:00 am,213.66772069815866,0.40964137030417769,1.7572719484566335,0.50216650119712725,0,2.6067499392712969,2.3846934629630017,0,0.97752880445414525,0,0,0.038205599944195527,2.6067499392712969
5/09/2023 12:00:00 am,214.89908510915976,0.48113606510622686,1.62006149593212,0.4990996980511076,0,3.0878860043775238,2.8248438632638835,0.40666071787588326,1,0.32866843383935418,0,0.057538948741887454,3.0878860043775238
6/09/2023 12:00:00 am,216.33066663702968,0.56889007802553682,1.5009048755458991,0.49956673034957039,0,3.6567760824030606,3.3452729346428001,0,0.98196969696969683,0,0,0.085818897964455659,3.6567760824030606
7/09/2023 12:00:00 am,217.54317934974611,0.66598396236142987,1.3839645116672159,0.49453216341064271,0,4.3227600447644905,3.9545249298401086,0,0.95759885595276351,0,0,0.125791373849202,4.3227600447644905
8/09/2023 12:00:00 am,218.52564393422867,0.78844602723241586,1.2857061205546785,0.48520449116028891,0,5.1112060719969064,4.6758070362342066,0,0.93870374683335445,0,0,0.18103290036840899,5.1112060719969064
9/09/2023 12:00:00 am,219.26393672530907,0.90499809509752716,1.1756699498461245,0.46762093633182233,0,6.0162041670944335,5.5037127010086122,0,0.92518827504107304,0,0,0.25166847428831168,6.0162041670944335
10/09/2023 12:00:00 am,219.76153437768667,1.0104991605906211,1.0646491825999647,0.44344763036826956,0,7.0267033276850546,6.4281323034748459,0,0.91260676958523068,0,0,0.33447271234251963,7.0267033276850546
11/09/2023 12:00:00 am,219.99803892422287,1.2377563613006553,1.016179906418671,0.45808100141819025,0,8.2644596889857098,7.5604501599239642,0,0.90448377648059342,0,0,0.43396261330265906,8.2644596889857098
12/09/2023 12:00:00 am,219.9041739833653,1.5310841727260343,0.97152123077857766,0.46569800108990439,0,9.7955438617117441,8.9611086438622252,0,0.87989198298073545,0,0,0.5448855398281659,9.7955438617117441
13/09/2023 12:00:00 am,219.40534696508192,1.9160983943121064,0.93127818883651514,0.48599318719219592,0,11.71164225602385,10.71398384162182,0,0.8705941417351829,0,0,0.65767925708595032,11.71164225602385
14/09/2023 12:00:00 am,218.45382559157295,2.3152991885492167,0.87056612312650827,0.49321169191373249,0,14.026941444573067,12.832053840035364,0,0.86634800615117202,0,0,0.75696597122082054,14.026941444573067
15/09/2023 12:00:00 am,216.99161248848614,2.7462211002255099,0.80491645334143413,0.4790915437972656,0,16.773162544798577,15.344337587278696,0,0.83987697873723255,0,0,0.83504364221007077,16.773162544798577
16/09/2023 12:00:00 am,214.81480061565557,3.4410232689718612,0.77156150959230274,0.49264988654897568,0,20.214185813770438,18.492236651856661,0,0.81609727784982755,0,0,0.89450886701683885,20.214185813770438
17/09/2023 12:00:00 am,211.85950157394896,4.1575854958775302,0.72055886578016271,0.4817275883907432,0,24.371771309647968,22.295657457344625,0,0.78024075458446884,0,0,0.93500161371223844,24.371771309647968
18/09/2023 12:00:00 am,208.46798265881893,4.4711130763905587,0.62716586901780147,0.4524282922427203,0,28.842884386038527,26.38589793833895,0,0.79177982843468131,0,0,0.95908614661236447,28.842884386038527
19/09/2023 12:00:00 am,204.75891680746855,4.6770722650511942,0.54840987425940568,0.41959653944143926,0,33.519956651089721,30.664552936367262,0,0.79557522876854714,0,0,0.97346831189048688,33.519956651089721
20/09/2023 12:00:00 am,200.38898008571692,5.2964884698029167,0.51011022111725879,0.41644152693403191,0,38.816445120892638,35.509859055038817,0,0.78477710588882987,0,0,0.98293960846111894,38.816445120892638
21/09/2023 12:00:00 am,195.30635964861116,5.9662531161280512,0.47551254214367589,0.40812013687862153,0,44.782698237020689,40.967875794607806,0,0.76182130274563953,0,0,0.98912092956833275,44.782698237020689
22/09/2023 12:00:00 am,189.27711407983372,6.8934908031273423,0.45258114321346454,0.4116640911364331,0,51.676189040148031,47.274143307098377,0,0.73672116380327135,0,0,0.99322071672438417,51.676189040148031
23/09/2023 12:00:00 am,182.34412743118867,7.7706482315267991,0.42641504546821807,0.4112465374135289,0,59.446837271674831,54.382847430013641,0,0.71418520387180129,0,0,0.99584305660979977,59.446837271674831
24/09/2023 12:00:00 am,174.1317209916655,9.0626078959253604,0.41422291635062436,0.43597854005160502,0,68.509445167600191,62.673455394063872,0,0.70163490562644604,0,0,0.99755040118444593,68.509445167600191
25/09/2023 12:00:00 am,165.52494085152989,9.4085782113885443,0.37491939395735585,0.42687867729557322,0,77.918023378988735,71.280562128185991,0,0.70331477395222497,0,0,0.99853986019503005,77.918023378988735
26/09/2023 12:00:00 am,156.87321932295907,9.5195003846193202,0.33913171512247686,0.52864714092604592,0,87.437523763608056,79.989142109671079,0,0.88832429331162233,0,13.200000000000005,0.99911764267161374,87.437523763608056
27/09/2023 12:00:00 am,147.82083120637975,9.9034509174254453,0.31751756215886928,0.53354523868724013,0,97.340974681033501,89.048965726723253,0,0.8795385566110252,0,0,0.99947251374544777,97.340974681033501
28/09/2023 12:00:00 am,139.07419125194949,9.5351913341950478,0.28606900629588949,0.50248237346888569,0,106.87616601522855,97.771900021338723,0,0.86044905417859741,0,0,0.99967887560410063,106.87616601522855
29/09/2023 12:00:00 am,130.53991950290418,9.2814414889409278,0.26372864945875563,0.48344109043688954,0,116.15760750416948,106.26270019825874,0,0.83469243172098284,0,0,0.99980397435547286,116.15760750416948
30/09/2023 12:00:00 am,121.65290876518293,9.650914363711081,0.25807973539345141,0.50582389059634913,0,125.80852186788056,115.09149963469073,0,0.80726905146127337,0,0,0.99988525861264388,125.80852186788056
1/10/2023 12:00:00 am,113.20314500801096,9.1914781321194425,0.24100812480745049,0.50070625014003045,0,135,123.5,0,0.78620895067215124,0,0,0.99993345063478134,135
1/09/2023 12:00:00 am,207.34783723028369,0,2.2209014587173925,0.4999821073864007,0,1.7471814378219308,1.6167100966858776,0,0.97393944036503077,0,0,0.010258361860937579,1.7471814378219308
2/09/2023 12:00:00 am,209.65244709052376,0.34605097533611962,2.1245951574914557,0.5260656780847297,0,2.0932324131580504,1.9369196030845597,0,0.97357814418361355,0,0,0.016085510208408746,2.0932324131580504
3/09/2023 12:00:00 am,211.72426227754957,0.41309884329333002,1.9595993623894543,0.5253146679297056,0,2.5063312564513804,2.3191701561319595,0,0.97007724119139671,0,0,0.025121219147158948,2.5063312564513804
4/09/2023 12:00:00 am,213.5164061270045,0.46729460019883984,1.7572719484566335,0.50216650119712725,0,2.9736258566502203,2.7515693803419246,0,0.97752880445414525,0,0,0.038205599944195527,2.9736258566502203
5/09/2023 12:00:00 am,214.68046878677563,0.54885151130636256,1.62006149593212,0.4990996980511076,0,3.5224773679565828,3.2594352268429421,0.40624702290573039,1,0.32866843383935418,0,0.057538948741887454,3.5224773679565828
6/09/2023 12:00:00 am,216.03198430366419,0.64895608900690949,1.5009048755458991,0.49956673034957039,0,4.1714334569634923,3.8599303092032313,0,0.98196969696969683,0,0,0.085818897964455659,4.1714334569634923
7/09/2023 12:00:00 am,217.15076594019641,0.75971503854563061,1.3839645116672159,0.49453216341064271,0,4.9311484955091229,4.5629133805847406,0,0.95759885595276351,0,0,0.125791373849202,4.9311484955091229
8/09/2023 12:00:00 am,218.02226404677219,0.89941250513919968,1.2857061205546785,0.48520449116028891,0,5.8305610006483226,5.3951619648856228,0,0.93870374683335445,0,0,0.18103290036840899,5.8305610006483226
9/09/2023 12:00:00 am,218.63318673557964,1.0323681973705128,1.1756699498461245,0.46762093633182233,0,6.8629291980188354,6.3504377319330132,0,0.92518827504107304,0,0,0.25166847428831168,6.8629291980188354
10/09/2023 12:00:00 am,218.98856598757783,1.152717560970042,1.0646491825999647,0.44344763036826956,0,8.0156467589888774,7.4170757347786687,0,0.91260676958523068,0,0,0.33447271234251963,8.0156467589888774
11/09/2023 12:00:00 am,219.05086778696801,1.4119591084466716,1.016179906418671,0.45808100141819025,0,9.427605867435549,8.7235963383738042,0,0.90448377648059342,0,0,0.43396261330265906,9.427605867435549
12/09/2023 12:00:00 am,218.74151692550458,1.7465700933319219,0.97152123077857766,0.46569800108990439,0,11.174175960767471,10.339740742917952,0,0.87989198298073545,0,0,0.5448855398281659,11.174175960767471
13/09/2023 12:00:00 am,217.97301679987359,2.1857715016597385,0.93127818883651514,0.48599318719219592,0,13.359947462427209,12.362289048025177,0,0.8705941417351829,0,0,0.65767925708595032,13.359947462427209
14/09/2023 12:00:00 am,216.69563850353177,2.6411561113820685,0.87056612312650827,0.49321169191373249,0,16.001103573809278,14.806215969271573,0,0.86634800615117202,0,0,0.75696597122082054,16.001103573809278
15/09/2023 12:00:00 am,214.84692020856136,3.1327262921090977,0.80491645334143413,0.4790915437972656,0,19.133829865918376,17.705004908398497,0,0.83987697873723255,0,0,0.83504364221007077,19.133829865918376
16/09/2023 12:00:00 am,212.18581617194954,3.9253154327530879,0.77156150959230274,0.49264988654897568,0,23.059145298671464,21.337196136757687,0,0.81609727784982755,0,0,0.89450886701683885,23.059145298671464
17/09/2023 12:00:00 am,208.64537546786016,4.7427271582602941,0.72055886578016271,0.4817275883907432,0,27.801872456931758,25.725758604628414,0,0.78024075458446884,0,0,0.93500161371223844,27.801872456931758
18/09/2023 12:00:00 am,204.62458878642332,5.1003808426973798,0.62716586901780147,0.4524282922427203,0,32.902253299629137,30.445266851929556,0,0.79177982843468131,0,0,0.95908614661236447,32.902253299629137
19/09/2023 12:00:00 am,200.25726831999168,5.3353268801324631,0.54840987425940568,0.41959653944143926,0,38.237580179761601,35.382176465039144,0,0.79557522876854714,0,0,0.97346831189048688,38.237580179761601
20/09/2023 12:00:00 am,195.14189988767518,6.0419201803677751,0.51011022111725879,0.41644152693403191,0,44.279500360129376,40.972914294275562,0,0.78477710588882987,0,0,0.98293960846111894,44.279500360129376
21/09/2023 12:00:00 am,189.2195845675588,6.8059479991386667,0.47551254214367589,0.40812013687862153,0,51.085448359268042,47.270625916855174,0,0.76182130274563953,0,0,0.98912092956833275,51.085448359268042
22/09/2023 12:00:00 am,182.22014399685969,7.8636858050489735,0.45258114321346454,0.4116640911364331,0,58.949134164317016,54.547088431267362,0,0.73672116380327135,0,0,0.99322071672438417,58.949134164317016
23/09/2023 12:00:00 am,174.19351056007383,8.864295019667594,0.42641504546821807,0.4112465374135289,0,67.81342918398461,62.749439342323434,0,0.71418520387180129,0,0,0.99584305660979977,67.81342918398461
24/09/2023 12:00:00 am,164.70562597223525,10.338086044240782,0.41422291635062436,0.43597854005160502,0,78.151515228225392,72.31552545468908,0,0.70163490562644604,0,0,0.99755040118444593,78.151515228225392
25/09/2023 12:00:00 am,154.77467556531161,10.732748478176575,0.37491939395735585,0.42687867729557322,0,88.884263706401967,82.246802455599223,0,0.70331477395222497,0,0,0.99853986019503005,88.884263706401967
26/09/2023 12:00:00 am,144.78317250112772,10.859281920232405,0.33913171512247686,0.52864714092604592,0,99.743545626634372,92.295163972697381,0,0.88832429331162233,0,13.200000000000005,0.99911764267161374,99.743545626634372
27/09/2023 12:00:00 am,134.33696536654037,11.297269935433476,0.31751756215886928,0.53354523868724013,0,111.04081556206785,102.7488066077576,0,0.8795385566110252,0,0,0.99947251374544777,111.04081556206785
28/09/2023 12:00:00 am,124.24833552063079,10.877181225674363,0.28606900629588949,0.50248237346888569,0,121.91799678774221,112.81373079385236,0,0.86044905417859741,0,0,0.99967887560410063,121.91799678774221
29/09/2023 12:00:00 am,114.40778682129013,10.587718439236298,0.26372864945875563,0.48344109043688954,0,132.50571522697851,122.61080792106779,0,0.83469243172098284,0,0,0.99980397435547286,132.50571522697851
30/09/2023 12:00:00 am,104.16249924719469,11.00919120008524,0.25807973539345141,0.50582389059634913,0,143.51490642706375,132.79788419387393,0,0.80726905146127337,0,0,0.99988525861264388,143.51490642706375
1/10/2023 12:00:00 am,94.419120049205887,10.485093572936279,0.24100812480745049,0.50070625014003045,0,154.00000000000003,142.5,0,0.78620895067215124,0,0,0.99993345063478134,154.00000000000003
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