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Now using nf-test for pipeline level testing #184

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Now using nf-test for pipeline level testing

Now using nf-test for pipeline level testing #184

Run time

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Job Run time
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20s
tests/hicparam/main.nf.test docker NF-24.04.2
2m 14s
modules/nf-core/seqkit/seq/tests/main.nf.test docker NF-24.04.2
1m 14s
tests/stub/main.nf.test docker NF-24.04.2
6m 54s
modules/gallvp/bwa/mem/tests/main.nf.test docker NF-24.04.2
2m 1s
modules/nf-core/minimap2/align/tests/main.nf.test docker NF-24.04.2
2m 46s
modules/nf-core/custom/sratoolsncbisettings/tests/main.nf.test docker NF-24.04.2
40s
modules/gallvp/custom/restoregffids/tests/main.nf.test docker NF-24.04.2
53s
modules/gallvp/syri/tests/main.nf.test docker NF-24.04.2
1m 3s
modules/gallvp/ltrharvest/tests/main.nf.test docker NF-24.04.2
1m 41s
subworkflows/nf-core/utils_nextflow_pipeline/tests/main.workflow.nf.test docker NF-24.04.2
45s
tests/minimal/main.nf.test docker NF-24.04.2
1m 32s
subworkflows/nf-core/utils_nfcore_pipeline/tests/main.workflow.nf.test docker NF-24.04.2
41s
modules/gallvp/gt/gff3validator/tests/main.nf.test docker NF-24.04.2
1m 3s
modules/nf-core/gunzip/tests/main.nf.test docker NF-24.04.2
52s
modules/nf-core/merqury/merqury/tests/main.nf.test docker NF-24.04.2
2m 31s
modules/nf-core/seqkit/sort/tests/main.nf.test docker NF-24.04.2
1m 13s
modules/gallvp/minimap2/align/tests/main.nf.test docker NF-24.04.2
2m 46s
modules/gallvp/busco/generateplot/tests/main.nf.test docker NF-24.04.2
1m 41s
subworkflows/nf-core/fasta_explore_search_plot_tidk/tests/main.nf.test docker NF-24.04.2
1m 6s
subworkflows/nf-core/fastq_download_prefetch_fasterqdump_sratools/tests/main.nf.test docker NF-24.04.2
1m 15s
modules/gallvp/custom/relabelfasta/tests/main.nf.test docker NF-24.04.2
1m 15s
subworkflows/nf-core/utils_nfschema_plugin/tests/main.nf.test docker NF-24.04.2
52s
modules/nf-core/fastavalidator/tests/main.nf.test docker NF-24.04.2
37s
modules/gallvp/custom/shortenfastaids/tests/main.nf.test docker NF-24.04.2
1m 20s
modules/gallvp/gunzip/tests/main.nf.test docker NF-24.04.2
1m 2s
modules/nf-core/meryl/count/tests/main.nf.test docker NF-24.04.2
48s
modules/gallvp/ltrretriever/ltrretriever/tests/main.nf.test docker NF-24.04.2
3m 27s
modules/nf-core/tidk/plot/tests/main.nf.test docker NF-24.04.2
41s
modules/gallvp/gt/gff3/tests/main.nf.test docker NF-24.04.2
48s
subworkflows/gallvp/fastq_bwa_mem_samblaster/tests/main.nf.test docker NF-24.04.2
53s
subworkflows/gallvp/fasta_ltrretriever_lai/tests/main.nf.test docker NF-24.04.2
8m 57s
modules/nf-core/tidk/search/tests/main.nf.test docker NF-24.04.2
54s
modules/gallvp/ltrfinder/tests/main.nf.test docker NF-24.04.2
1m 57s
modules/gallvp/gt/stat/tests/main.nf.test docker NF-24.04.2
49s
subworkflows/gallvp/fasta_gxf_busco_plot/tests/main.nf.test docker NF-24.04.2
3m 7s
modules/gallvp/samtools/faidx/tests/main.nf.test docker NF-24.04.2
1m 22s
modules/gallvp/samblaster/tests/main.nf.test docker NF-24.04.2
2m 54s
modules/nf-core/fcs/fcsadaptor/tests/main.nf.test docker NF-24.04.2
2m 13s
modules/nf-core/fastp/tests/main.nf.test docker NF-24.04.2
3m 30s
modules/nf-core/sratools/prefetch/tests/main.nf.test docker NF-24.04.2
1m 6s
subworkflows/nf-core/fastq_fastqc_umitools_fastp/tests/main.nf.test docker NF-24.04.2
4m 35s
subworkflows/nf-core/utils_nfcore_pipeline/tests/main.function.nf.test docker NF-24.04.2
1m 3s
modules/nf-core/untar/tests/main.nf.test docker NF-24.04.2
59s
modules/gallvp/gffread/tests/main.nf.test docker NF-24.04.2
1m 38s
tests/tiny/main.nf.test docker NF-24.04.2
1m 42s
subworkflows/gallvp/gff3_gt_gff3_gff3validator_stat/tests/main.nf.test docker NF-24.04.2
1m 25s
tests/noltr/main.nf.test docker NF-24.04.2
5m 31s
subworkflows/nf-core/utils_nextflow_pipeline/tests/main.function.nf.test docker NF-24.04.2
46s
tests/invalid/main.nf.test docker NF-24.04.2
1m 44s
modules/gallvp/seqkit/seq/tests/main.nf.test docker NF-24.04.2
1m 28s
modules/nf-core/sratools/fasterqdump/tests/main.nf.test docker NF-24.04.2
1m 44s
modules/nf-core/meryl/unionsum/tests/main.nf.test docker NF-24.04.2
51s
tests/hicparam/hicparam.nf.test docker NF-24.04.2
58s
modules/nf-core/seqkit/rmdup/tests/main.nf.test docker NF-24.04.2
1m 23s
modules/gallvp/cat/cat/tests/main.nf.test docker NF-24.04.2
1m 15s
modules/nf-core/tidk/explore/tests/main.nf.test docker NF-24.04.2
1m 10s
modules/gallvp/bwa/index/tests/main.nf.test docker NF-24.04.2
45s
modules/gallvp/busco/busco/tests/main.nf.test docker NF-24.04.2
4m 26s
modules/nf-core/umitools/extract/tests/main.nf.test docker NF-24.04.2
1m 10s
modules/nf-core/fastqc/tests/main.nf.test docker NF-24.04.2
2m 27s
modules/gallvp/ltrretriever/lai/tests/main.nf.test docker NF-24.04.2
3m 38s
modules/gallvp/plotsr/tests/main.nf.test docker NF-24.04.2
1m 15s
modules/nf-core/merqury/hapmers/tests/main.nf.test docker NF-24.04.2
1m 29s
confirm-pass
1s
1h 57m 6s