Remove outdated instructions for running unit tests with tox #98

	name: Polyphy CI

	on:
	push:
	branches: [ "main" ]
	pull_request:
	branches: [ "main" ]

	jobs:
	build:
	runs-on: ubuntu-latest

	steps:
	- name: Checkout repository
	uses: actions/checkout@v2

	- name: Create /tmp/flag file
	run: echo "This is a flag file" > /tmp/flag

	- name: Install Python dependencies
	run: \|
	python3 -m pip install --upgrade pip
	pip install -r requirements.txt

	- name: Run polyphy.py for 2D_discrete
	run: \|
	cd src/polyphy/ && python3 polyphy.py 2d_discrete -b -n 100 -f data/csv/sample_2D_linW.csv

	- name: Run polyphy.py for 3D_discrete
	run: \|
	cd src/polyphy/ && python3 polyphy.py 3d_discrete -b -n 100 -f data/csv/sample_3D_linW.csv

	- name: Check if 4 files are created in data/fits
	run: \|
	file_count=$(ls -1q data/fits/*.npy \| wc -l)
	if [ $file_count -eq 4 ]; then
	echo "Success: 4 files found in data/fits"
	else
	echo "Error: Expected 4 files in data/fits, found $file_count"
	exit 1
	fi

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