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activities/.DS_Store | ||
protocols/.DS_Store | ||
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__pycache__ | ||
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.idea/ | ||
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node_modules | ||
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# Validation | ||
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### Validating your schema | ||
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If you want to validate a schema you have created: | ||
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- install the reproschema python tools | ||
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```bash | ||
pip install reproschema | ||
``` | ||
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- run its `validate` command | ||
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```bash | ||
reproschema --log-level DEBUG validate PATH_TO_VALIDATE | ||
``` | ||
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!!! note | ||
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You can validate a single file or all the files in a folder and its subfolder. | ||
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### Automating validation | ||
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If you are hosting your schema on a github repository, | ||
you can automate the validation with a with GitHub CI workflow. | ||
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For example if you repository is structured like this: | ||
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```text | ||
├── protocols | ||
│ └── protocol-1.jsonld | ||
├── activities | ||
│ ├── items | ||
│ │ └── item-1.jsonld | ||
│ └── activity-1.jsonld | ||
└── README.md | ||
``` | ||
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create a `.github/workflows/validate.yml` file in this repository. | ||
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```text hl_lines="1-3" | ||
├── .github # hidden github folder | ||
│ └── workflows | ||
│ └── validate.yml # file the actions used to validate your schema | ||
├── protocols | ||
│ └── protocol-1.jsonld | ||
├── activities | ||
│ ├── items | ||
│ │ └── item-1.jsonld | ||
│ └── activity-1.jsonld | ||
└── README.md | ||
``` | ||
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Content of `validate.yml`: | ||
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```yaml | ||
name: validation | ||
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on: | ||
push: | ||
branches: [ main ] | ||
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jobs: | ||
build: | ||
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runs-on: ubuntu-latest | ||
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steps: | ||
- uses: actions/checkout@v4 | ||
- name: Set up Python | ||
uses: actions/setup-python@v5 | ||
with: | ||
python-version: 3.12 | ||
- name: Install dependencies | ||
run: | | ||
python -m pip install --upgrade pip setuptools | ||
pip install reproschema-py | ||
- name: validate | ||
run: | | ||
reproschema validate protocols | ||
reproschema validate activities | ||
``` | ||
!!! note | ||
Note that if you have created your schema | ||
using the [reproschema cookie cutter](../user-guide/create-new-protocol.md) | ||
then a validation workflow should already be included in your repository. |
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