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1. infercnv infercnv Public

   Forked from broadinstitute/infercnv

   Inferring CNV from Single-Cell RNA-Seq

   R

2. scTE scTE Public

   Forked from JiekaiLab/scTE

   Jupyter Notebook

3. scMatch scMatch Public

   Forked from asrhou/scMatch

   scMatch: a single-cell gene expression profile annotation tool using reference datasets

   Python

4. MACA MACA Public

   Forked from ImXman/MACA

   MACA: Marker-based automatic cell-type annotation for single cell expression data

   Jupyter Notebook

5. OnClass OnClass Public

   Forked from wangshenguiuc/OnClass

   Single cell typing based on cell ontology

   Python

6. HTAPP-Pipelines HTAPP-Pipelines Public

   Forked from klarman-cell-observatory/HTAPP-Pipelines

   A record of the analysis pipelines used to create the HTAPP data - with added inferCNV scripts

   Jupyter Notebook