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Andrew Roth committed Aug 31, 2020
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Expand Up @@ -47,7 +47,7 @@ This assumes you are running in the base directory of the git repo.
Here we run allowing for up to 40 clusters (clones), using the Beta-Binomial distribution and performing 10 random restarts.
This should take a under five minutes.
```
pyclone-vi fit -i examples/tracerx.tsv -o tracerx.h5 -c 40 -d beta-binomial -r 100
pyclone-vi fit -i examples/tracerx.tsv -o tracerx.h5 -c 40 -d beta-binomial -r 10
```

3. Next we output the final results from the best random restart.
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