Code

Adds meta-analysis#155

Code

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kelshmo wants to merge 14 commits intomasterSage-Bionetworks/sageseqr:masterfrom meta-pieceSage-Bionetworks/sageseqr:meta-pieceCopy head branch name to clipboard

+392

Commits

Commits on Jun 22, 2021

• pkg dependency

  

  kelshmo

  committed
  8934da5

• take residuals as inputs from synapse

  

  kelshmo

  committed
  25f32fa

Commits on Jul 1, 2021

• adds function to compute rowmeans and rowsds for gene matrices

  

  kelshmo

  committed
  3a384fc

• documentation

  

  kelshmo

  committed
  a80b473

• drop dimnames and fix tests

  

  kelshmo

  committed
  cebe1dc

• parallelize row means and row sds computation

  

  kelshmo

  committed
  52345ce

• cite testthat pkg

  

  kelshmo

  committed
  34bb855

Commits on Jul 9, 2021

• return warning when metadata and counts don't match

  

  kelshmo

  committed
  3ab03e9

• add furrr package

  

  kelshmo

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  0efe401

• tests and new functions to wrap metacont

  

  kelshmo

  committed
  4b145fd

• update namespace with new functions

  

  kelshmo

  committed
  6f3ca56

Commits on Jul 11, 2021

• ideas for improving efficiency and qc

  

  kelshmo

  committed
  1ede2d7

Commits on Jul 22, 2021

• add assert statements

  

  kelshmo

  committed
  1b65b54

• safer computations with inner joins

  

  kelshmo

  committed
  4434582