Branch current_stable to development

3rdparty/patch-configs.py

@@ -0,0 +1,23 @@
+# Patch Qwt and Qwtplot3D configurations to fit into SciDAVis/Windows build process
+
+qwt_conf = "qwt/qwtconfig.pri"
+qwtplot3d_conf = "qwtplot3d/qwtplot3d.pro"
+
+# patch Qwt config file
+with open(qwt_conf, 'r') as file:
+  content = file.readlines()
+with open (qwt_conf, 'w') as file:
+  for line in content:
+    if ("QwtDll" in line or "QwtWidgets" in line or "QwtDesigner" in line) and line[0] != '#':
+      file.write("#")
+    file.write(line)
+
+# patch Qwtplot3D config file
+with open(qwtplot3d_conf, 'r') as file:
+  content = file.readlines()
+with open(qwtplot3d_conf, 'w') as file:
+  for line in content:
+    if ("vclib" in line or "DESTDIR" in line) and line[0] != '#':
+      file.write("#")
+    file.write(line.replace("debug", "release"))
+  file.write("\nDESTDIR = ../../output\n")

CHANGES

@@ -0,0 +1,231 @@
+SciDAVis changelog
+
+=== Release 0.1.0, 2007-08-05 ===
+Most important changes (since QtiPlot 0.9-rc2):
+- improved handling of custom decimal separators
+- many improvements/additions to Python scripting
+- improved user interface: restructured menus and tool bars, several restructured dialogs
+- script window removed since notes offer the same capabilities
+- more stable project loading/saving
+- easier ASCII import/export, improved appending of projects and Origin graphs
+- lots of small improvements and bug fixes
+- export to eps and pdf without large white borders
+
+=== Release 0.1.1, 2007-12-21 ===
+Most important changes (since 0.1.0)
+- several bugs fixed
+
+=== Release 0.1.2, 2008-02-03 ===
+Most important changes (since 0.1.1)
+- fixed crash when changing the type of a curve
+- fixed crash when plotting an empty table
+- fixed the fit wizard which did not accept function definition
+- fixed pasting into tables
+- fixed some other minor issues
+
+=== Release 0.1.3, 2008-04-19 ===
+Most important changes (since 0.1.2)
+- page orientation for PDF/EPS export can now be chosen manually
+- executing script code now gives a visual feedback
+- new Windows installer
+- many improvements to make compilation and Linux packaging easier
+- fixed graph duplication
+- fixed unnecessary graph rescaling
+- several other bugs fixed
+
+=== Release 0.2.0-beta1, 2008-08-10 ===
+Most important changes (since 0.1.3)
+- multi-level undo/redo for all operations on
+  tables and matrices
+- many operations on tables and matrices now support
+  non-contiguous selections
+- the important options/controls for matrices
+  and tables are now integrated in a sidebar
+  of control tabs which make working with
+  column or matrix based data much more
+  convenient (almost no more opening and closing of
+  dialogs necessary)
+- tables now support different formulas
+  for each cell
+- numeric values are now stored independent of
+  their textual representation, i.e., you don't
+  lose data when hiding decimal digits
+- date/time values are now internally stored
+  as QDateTime objects which opens up many
+  new possibilities of date/time manipulation 
+  using PyQt/Python scripting
+
+Known issues (to be fixed until 0.2.0 stable):
+- the Python bindings for the new table
+  features are not finished yet
+- there is currently no way to display which
+  formula has been assigned to which cell
+  in a table
+- the date/time column functionality has
+  not been completely integrated and may
+  lead to empty plots in many cases
+
+=== Release 0.1.4, 2009-02-08 ===
+Most important changes (since 0.1.3)
+
+- Weighted linear and polynomial fits required actual weights
+ (1/sigma^2) to be specified in place of standard errors, while all others
+ (as well as error bar plots) needed the standard errors themselves.
+ Solution:  Switched everything to using standard errors, eliminating the term
+				"weighting" from the GUI and most of the source code.
+ Rationale: Avoid confusion for users, especially given the previous
+				inconsistent treatment of the matter. Avoid confusion for
+				devs. Arbitrary weights don't work naturally with non-linear fits;
+				and they almost certainly lead to nonsensical error estimates of
+				results (unless you _really_ know what you're doing, in which case
+				you can simply specify 1/sqrt(weight) as standard error).
+
+- Fixed estimation of parameter errors in case of non-linear fitting with
+  unknown Y errors.
+
+- Fixed computation of R^2 in case of known Y errors.
+
+- Fixed handling of parameters in fit curve formulas as well as constant
+  fit parameters; both of which used naive string-substitution; i.e. if
+  you used parameter names which appeared elsewhere as substrings of other
+  parameter names or functions, you'd get weird errors. Unfortunately, the fix
+  makes non-linear fitting with user-supplied formulas a bit slower; hopefully,
+  we'll come up with a Really Good Solution(tm) for one of the next major
+  releases.
+
+- Fixed problem with FFT filters which could lead to incorrect results:
+  Cutoffs could fall between real and imaginary part of a Fourier component,
+  producing a reduced amplitude and bogus phase at this point.
+
+- Fixed crash when creating bargraph with errorbars.
+
+- New Russian translation by f0ma.
+
+- Ported the hack that prevents axes gaps in graph vector exports
+  (eps, pdf, svg) from QtiPlot.
+
+- Numerous small tweaks and bug fixes.
+
+=== Release 0.2.0, 2009-02-14 ===
+Most important changes (since 0.1.4)
+- multi-level undo/redo for all operations on
+  tables and matrices
+- many operations on tables and matrices now support
+  non-contiguous selections
+- the important options/controls for matrices
+  and tables are now integrated in a sidebar
+  of control tabs which make working with
+  column or matrix based data much more
+  convenient (almost no more opening and closing of
+  dialogs necessary)
+- tables now support different formulas
+  for each cell
+- numeric values are now stored independent of
+  their textual representation, i.e., you don't
+  lose data when hiding decimal digits
+- formula edit mode: tables feature a new
+  mode which allows the user to individually edit
+  the formula for each cell 
+- invalid cells: tables now mark cells without
+  input as invalid rather than treating them
+  as 0; these cells are ignored in plots
+- date/time values are now internally stored
+  as QDateTime objects which opens up many
+  new possibilities of date/time manipulation 
+  using PyQt/Python scripting
+- many bug fixes
+
+=== Release 0.2.1, 2009-03-09 ===
+Most important changes (since 0.2.0)
+- fixed saving of project files with function/fit curves
+- fixed opening of backup copy on discovery of a corrupt project file
+- Spanish translation update by Mauricio Troviano
+- fixed several regressions introduced by the table/matrix rewrites in 0.2.0
+- added per mille and per ten thousand signs to SymbolDialog
+- compatibility problems between SIP versions triggers a warning instead of a
+  crash (happens sometimes when SIP version at runtime differs from the one
+  used at compile time)
+
+=== Release 0.2.2, 2009-04-19 ===
+Most important changes (since 0.2.1)
+- added Brazilian Portuguese translation by Fellype do Nascimento
+- fixed opening of legacy files with non-numeric data
+- fixed various crashes
+- fixed importing of numeric data as new rows or overwriting the current table
+- fixed various issues with invalid/empty cells
+- implemented a more sophisticated file-saving protocol, which is supposed to
+  protect against data loss in the event of a system crash shortly after saving
+  the file; see
+  http://bugs.launchpad.net/ubuntu/+source/linux/+bug/317781/comments/54
+- performance improvements
+- Python function Table.importASCII() reimplemented, which was missing in
+  SciDAVis 0.2.0 and 0.2.1.
+
+=== Release 0.2.3, 2009-07-05 ===
+Most important changes (since 0.2.2)
+- fixed many more bugs, including various crashes
+- performance improvements
+- improved pasting of cells from OpenOffice.org Calc and KSpread into tables
+- Brazilian Portuguese and German translations improved
+- Some build system fixes for building on MacOS X Tiger and detecting lupdate-qt4/lupdate
+- now also compatible with Qwt 5.2.0
+- main window remembers size from the last session instead of always displaying maximized
+- added the following methods to the Python interface:
+    MDIWindow.name()
+	 MDIWindow.setName(string)
+	 Note.text()
+	 Note.setText(string)
+	 Note.executeAll()
+	 Note.setAutoexec(bool)
+	 Note.exportASCII(filename)
+	 Note.importASCII(filename)
+
+=== Release 0.2.4, 2010-03-12 ===
+Most important changes (since 0.2.3)
+- Some parts of the Python API have been marked as deprecated and generate warnings when used. This
+  may be a bit unusual for a bugfix release; on the other hand, they won't be removed any time soon
+  and inserting the deprecation warnings now will give everyone as much time as possible for getting
+  accustomed to the API we're moving towards.
+  Most prominently,
+    Table.cell(column,row) and
+	 Table.setCell(column,row,value)
+  are deprecated in favour of
+    Table.column(column - 1).valueAt(row - 1) and
+    Table.column(column - 1).setValueAt(row - 1, value)
+  (note that the column/row INDICES DIFFER BY ONE!); the same goes for
+    Table.text(c,r) -> Table.column(c - 1).textAt(r - 1) and
+    Table.setText(c,r,text) -> Table.column(c - 1).setTextAt(r - 1,text).
+  This serves multiple purposes. It simplifies the interfaces by grouping all functionality specific
+  to a certain column in the Column class; it allows column objects to be stored and passed around;
+  and it moves from the unconventional 1-based indexing to the more conventional 0-based indexing.
+  Future additions to the API will increasingly make use of the columns-as-objects paradigm.
+- lots of bugfixes, again including crashes
+- fixed compatibility issues with Qt 4.6 and SIP 4.9
+- performance improvements
+- substantially improved support for plots involving date/time data
+- added two Czech translations: a default one by Pavel Fric (feedback requested via
+  http://fripohled.blogspot.com) and an alternative one by Jan Helebrant
+- updated Spanish translation, thanks to Mauricio Troviano; Brazilian Portuguese translation, thanks
+  to Fellyp do Nascimento; and German translation
+- fixed and extended many parts of the API for Python scripts, including the new methods
+    Layer.pickPoint()
+	 MDIWindow.clone()
+	 Folder.save(filename)
+	 newGraph(string)
+	 Layer.printDialog()
+	 Graph.printDialog()
+	 Layer.setRightTitle(string)
+	 Layer.setTopTitle(string)
+	 Layer.grid() # => returns an instance of the new class Grid
+	 Layer.insertFunctionCurve(formula,from=0,to=1,points=100,title="")
+	 Layer.insertPolarCurve(radial_formula,angular_formula,from=0,to=2*pi,parameter="t",points=100,title="")
+	 Layer.insertParametricCurve(x_formal,y_formula,from=0,to=1,parameter="t",points=100,title="")
+	 Matrix.recalculate()
+  the constants QwtPlot.yLeft, QwtPlot.yRight, QwtPlot.xBottom, QwtPlot.xTop for specifying axes
+  and the Grid class
+- multiple graphs can have active tools simultaneously
+- based on user feedback, the default behaviour when importing ASCII files has been changed to
+  interpret the data as numeric (only applies to fresh installations of SciDAVis)
+- automatic resizing of table rows for multi-line cells intentionally dropped, because this seems
+  to be rarely needed and has a huge impact on performance for large tables
+

qtfrontend/Doxyfile → Doxyfile

@@ -2,7 +2,7 @@
 # Project related configuration options
 #---------------------------------------------------------------------------
 PROJECT_NAME           = SciDAVis
-PROJECT_NUMBER         = 0.3.0
+PROJECT_NUMBER         = 0.2.4
 OUTPUT_DIRECTORY       = API
 CREATE_SUBDIRS         = NO
 OUTPUT_LANGUAGE        = English
@@ -68,7 +68,7 @@ WARN_LOGFILE           =
 #---------------------------------------------------------------------------
 # configuration options related to the input files
 #---------------------------------------------------------------------------
-INPUT                  = ./
+INPUT                  = scidavis/src
 FILE_PATTERNS          = *.c \
                          *.cc \
                          *.cxx \
@@ -84,10 +84,9 @@ FILE_PATTERNS          = *.c \
                          *.HH \
                          *.H++ \
                          *.C \
-                         *.H \
-								 *.dox
+                         *.H
 RECURSIVE              = yes
-EXCLUDE                = tests 3rdparty
+EXCLUDE                =
 EXCLUDE_SYMLINKS       = NO
 EXCLUDE_PATTERNS       = *moc_*
 EXAMPLE_PATH           =