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1. EyeVideoAnalysis EyeVideoAnalysis Public

   Analysis output of trained DeepLabCut model to detect pupil position, size, and blinks.

   Python 2

2. ExperimentalProtocols ExperimentalProtocols Public

   Code to control and run experimental paradigms, e.g. using Bonsai and BonVision

   Python

3. Data Data Public

   For pre-processing raw data (two-photon, ephys, bonsai, ...) and loading/saving data.

   Python 3

4. Basics Basics Public

   Basic analysis and plotting functions

5. bombcell bombcell Public

   Forked from Julie-Fabre/bombcell

   Automated manual curation and cell classification of spike-sorted electrophysiology data in MATLAB. Fine-tuned for kilosorted Neuropixels data.

   MATLAB

6. roiClassGUI roiClassGUI Public

   Simple GUI to classify ROIs in an image as bright or dark.

   MATLAB