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Release/v0.3.3 #47

Merged
merged 2 commits into from
Oct 29, 2024
Merged

Release/v0.3.3 #47

merged 2 commits into from
Oct 29, 2024

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gventuri
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@gventuri gventuri commented Oct 29, 2024

Summary by CodeRabbit

Release Notes

  • New Features

    • Enhanced chat functionality with improved document extraction and processing.
    • Integrated Rollbar for error tracking in the frontend, providing better error handling and user feedback.
    • Introduced user-friendly error fallback components to improve error management experience.
  • Bug Fixes

    • Improved error handling mechanisms across various components to ensure smoother operation.
  • Documentation

    • Updated environment configuration with new variables for better integration.
  • Tests

    • Added new test cases for the vectorization process to ensure reliability and accuracy.

* feat[chat]: vectorize extraction result for improved chat content

* feat[Chat]: use references from extraction results as well
* feat(rollbar): add error boundaries on app and main view

* refactor(rollbar): clean up error handling component

* feat[Rollbar]: improve router logic
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coderabbitai bot commented Oct 29, 2024

Walkthrough

The changes in this pull request introduce enhancements across several files, primarily focusing on the chat functionality and error handling mechanisms. The chat function in chat.py has been updated to improve document extraction and processing. New attributes related to chat extraction have been added in config.py. The process_queue.py file sees the addition of a new function for vectorizing extraction results. Frontend updates include the integration of Rollbar for error tracking and the introduction of an ErrorFallback component for user-friendly error handling.

Changes

File Path Change Summary
backend/app/api/v1/chat.py Enhanced chat function to create a ChromaDB instance for document extraction, handling metadata, and updating document references. Maintained error handling with consistent logging and exception raising.
backend/app/config.py Added two attributes to Settings: chat_extraction_doc_threshold (float, default 0.5) and chat_extraction_max_docs (int, default 50).
backend/app/processing/process_queue.py Introduced vectorize_extraction_process_step function for vectorizing extraction results. Updated process_step_task to include the new function and improved error handling. Minor adjustments to process status management.
backend/tests/processing/test_process_queue.py Added tests for vectorize_extraction_process_step with three new test cases. Updated imports to use MagicMock.
frontend/.env.example Added NEXT_PUBLIC_ROLLBAR_ACCESS_TOKEN variable and ensured newline at the end of the file for NEXT_PUBLIC_MIXPANEL_TOKEN.
frontend/package.json Updated to include new dependencies: @rollbar/react and rollbar.
frontend/src/app/(app)/layout.tsx Integrated ErrorBoundary component from @rollbar/react for enhanced error handling in the layout.
frontend/src/app/layout.tsx Added Rollbar integration with a new rollbarConfig object, restructured component layout to nest ReactQueryClientProvider within ErrorBoundary.
frontend/src/components/ErrorFallback.tsx Introduced ErrorFallback component for user-friendly error handling, including interfaces for props and state management. Provided two exported components: GlobalErrorFallback and ViewErrorFallback.

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Codecov Report

Attention: Patch coverage is 64.51613% with 11 lines in your changes missing coverage. Please review.

Project coverage is 60.22%. Comparing base (d876353) to head (e8ecf9a).

Files with missing lines Patch % Lines
backend/app/processing/process_queue.py 71.42% 6 Missing ⚠️
backend/app/api/v1/chat.py 37.50% 5 Missing ⚠️
Additional details and impacted files
@@            Coverage Diff             @@
##             main      #47      +/-   ##
==========================================
+ Coverage   60.15%   60.22%   +0.07%     
==========================================
  Files          37       37              
  Lines        1719     1750      +31     
==========================================
+ Hits         1034     1054      +20     
- Misses        685      696      +11     

☔ View full report in Codecov by Sentry.
📢 Have feedback on the report? Share it here.

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Actionable comments posted: 14

🧹 Outside diff range and nitpick comments (5)
backend/app/config.py (1)

29-31: Consider adding docstrings to document the purpose of these parameters.

Adding docstrings would help other developers understand:

  • The purpose of these parameters
  • The expected value ranges
  • The impact on the chat extraction process

Example:

class Settings(BaseSettings):
    # ... existing code ...

    # Extraction References for chat
    chat_extraction_doc_threshold: float = 0.5
    """Similarity threshold for document extraction (0 to 1). Higher values mean stricter matching."""
    
    chat_extraction_max_docs: int = 50
    """Maximum number of documents to extract for each chat query."""
frontend/src/components/ErrorFallback.tsx (1)

43-49: Add documentation for exported components.

The exported components would benefit from JSDoc documentation explaining their specific use cases and differences.

Add documentation like this:

+/**
+ * Global error fallback component with light text for dark backgrounds
+ * @example
+ * <ErrorBoundary FallbackComponent={GlobalErrorFallback}>
+ *   <App />
+ * </ErrorBoundary>
+ */
 export const GlobalErrorFallback = (props: ErrorFallbackProps) => (
   <ErrorFallbackBase {...props} textColor="text-white" />
 );

+/**
+ * View-specific error fallback component with dark text for light backgrounds
+ * @example
+ * <ErrorBoundary FallbackComponent={ViewErrorFallback}>
+ *   <View />
+ * </ErrorBoundary>
+ */
 export const ViewErrorFallback = (props: ErrorFallbackProps) => (
   <ErrorFallbackBase {...props} textColor="text-black" />
 );
backend/tests/processing/test_process_queue.py (1)

185-220: Consider adding more test coverage.

While the test effectively validates the basic functionality, consider adding:

  1. Verification of ChromaDB initialization parameters
  2. Error cases (e.g., invalid project_id, None references)

Example test case for ChromaDB initialization:

# Verify ChromaDB initialization
mock_chroma_db.assert_called_once_with(
    f"panda-etl-{project_id}",
    similarity_threshold=3
)
backend/app/api/v1/chat.py (1)

84-84: Consistency in concatenating references

When concatenating extraction_doc["reference"] with docs[index], ensure that the order reflects how you want the references to appear. Currently, the new reference is prepended. If the desired order is chronological, you may want to append instead.

Consider adjusting the concatenation:

-docs[index] = f'{extraction_doc["reference"]}\n\n{docs[index]}'
+docs[index] = f'{docs[index]}\n\n{extraction_doc["reference"]}'
backend/app/processing/process_queue.py (1)

88-96: Improve error message clarity

The error message references 'chat', which might be misleading in this context. Consider updating the message to accurately reflect the operation.

Apply this diff to improve the error message:

 except Exception:
-    logger.error(f"Failed to vectorize extraction results for chat {traceback.format_exc()}")
+    logger.error(f"Failed to vectorize extraction results: {traceback.format_exc()}")
📜 Review details

Configuration used: CodeRabbit UI
Review profile: CHILL

📥 Commits

Files that changed from the base of the PR and between d876353 and e8ecf9a.

⛔ Files ignored due to path filters (1)
  • frontend/yarn.lock is excluded by !**/yarn.lock, !**/*.lock
📒 Files selected for processing (9)
  • backend/app/api/v1/chat.py (1 hunks)
  • backend/app/config.py (1 hunks)
  • backend/app/processing/process_queue.py (3 hunks)
  • backend/tests/processing/test_process_queue.py (2 hunks)
  • frontend/.env.example (1 hunks)
  • frontend/package.json (2 hunks)
  • frontend/src/app/(app)/layout.tsx (2 hunks)
  • frontend/src/app/layout.tsx (2 hunks)
  • frontend/src/components/ErrorFallback.tsx (1 hunks)
🧰 Additional context used
🪛 Gitleaks
frontend/.env.example

3-3: Detected a Generic API Key, potentially exposing access to various services and sensitive operations.

(generic-api-key)

🔇 Additional comments (11)
frontend/src/app/(app)/layout.tsx (2)

7-8: LGTM! Error handling imports are properly structured.

The imports for error handling components are correctly placed and follow React best practices.


22-26: ⚠️ Potential issue

Verify Rollbar configuration setup.

While the ErrorBoundary implementation looks good, the Rollbar configuration seems to be missing. This is necessary for proper error tracking functionality.

Please add the Rollbar configuration before the layout component:

import { ErrorBoundary } from "@rollbar/react";
import { ViewErrorFallback } from "@/components/ErrorFallback";
+ import { Provider } from "@rollbar/react";
+
+ const rollbarConfig = {
+   accessToken: process.env.NEXT_PUBLIC_ROLLBAR_CLIENT_TOKEN,
+   environment: process.env.NODE_ENV
+ };

export default function RootLayout({

Also, wrap the entire layout with the Rollbar Provider:

export default function RootLayout({
  children,
}: Readonly<{
  children: React.ReactNode;
}>) {
  return (
+   <Provider config={rollbarConfig}>
      <SidebarProvider>
        <ScrollProvider>
          {/* ... existing layout code ... */}
        </ScrollProvider>
      </SidebarProvider>
+   </Provider>
  );
}

Let's verify the environment variable is properly set:

frontend/src/app/layout.tsx (1)

7-8: Verify component naming consistency

The import statement uses GlobalErrorFallback but the AI summary mentions ViewErrorFallback. Please ensure the component name is consistent across the codebase.

frontend/src/components/ErrorFallback.tsx (2)

1-13: LGTM! Clean imports and well-structured interfaces.

The imports are well-organized and the interfaces are properly typed with clear separation of concerns.


1-49: Verify error boundary integration in layout files.

Let's confirm that the ErrorFallback components are properly integrated with ErrorBoundary components.

✅ Verification successful

Error boundary integration is properly implemented

The error boundaries are correctly set up in the layout files:

  • Root layout (frontend/src/app/layout.tsx) uses GlobalErrorFallback with white text
  • App layout (frontend/src/app/(app)/layout.tsx) uses ViewErrorFallback with black text
  • Both layouts properly import ErrorBoundary from @rollbar/react
🏁 Scripts executed

The following scripts were executed for the analysis:

Script:

#!/bin/bash
# Description: Verify ErrorBoundary usage with ErrorFallback components

# Search for ErrorBoundary usage with our components
echo "Checking ErrorBoundary integration..."
rg -l "ErrorBoundary.*(?:Global|View)ErrorFallback" --type tsx

# Check if ErrorBoundary is imported where our components are used
echo "Checking ErrorBoundary imports..."
rg "import.*ErrorBoundary" --type tsx

Length of output: 322


Script:

#!/bin/bash
# Description: Verify ErrorBoundary usage with ErrorFallback components

# Search for ErrorBoundary usage with our components (without file type restriction)
echo "Checking ErrorBoundary integration..."
rg -l "ErrorBoundary.*(?:Global|View)ErrorFallback"

# Check for ErrorBoundary imports
echo "Checking ErrorBoundary imports..."
rg "import.*ErrorBoundary"

# Find all layout files that might use ErrorBoundary
echo "Checking layout files..."
fd "layout\.(ts|tsx|js|jsx)$"

# Search for usage of our ErrorFallback components
echo "Checking ErrorFallback usage..."
rg "(Global|View)ErrorFallback"

Length of output: 1361

frontend/package.json (1)

43-43: LGTM!

The rollbar package is correctly added as a dependency, which is required as a peer dependency for @rollbar/react.

backend/tests/processing/test_process_queue.py (1)

3-3: LGTM: Import changes are appropriate.

The addition of MagicMock and vectorize_extraction_process_step imports aligns with the new test requirements.

Also applies to: 9-9

backend/app/api/v1/chat.py (3)

68-85: Ensure compatibility with the ChromaDB API

Verify that the usage of ChromaDB and its methods aligns with the latest API specifications. Any discrepancies may lead to runtime errors.

Consult the ChromaDB documentation or codebase to confirm that parameters like similarity_threshold and methods like get_relevant_docs are used correctly.


78-85: ⚠️ Potential issue

Correct the indexing when iterating over extraction_docs["metadatas"]

Accessing extraction_docs["metadatas"][0] assumes that the first element contains all metadata, which may not be accurate. Instead, you should iterate over all metadata entries to ensure all relevant documents are processed.

Apply this diff to fix the iteration:

-# Append text from single documents together
-for extraction_doc in extraction_docs["metadatas"][0]:
+for extraction_doc in extraction_docs["metadatas"]:

Double-check that extraction_docs["metadatas"] is a list of metadata dictionaries corresponding to your documents.


72-75: Verify the return structure of get_relevant_docs

Ensure that the get_relevant_docs method returns data in the expected format. Misalignment in the expected structure can lead to KeyError or incorrect data processing in subsequent steps.

Run the following script to confirm the structure of extraction_docs:

✅ Verification successful

Based on the search results, I can now provide a definitive response about the structure of get_relevant_docs:

Return structure of get_relevant_docs is consistent with usage

From the test file and implementation, we can see that get_relevant_docs returns a dictionary with expected keys including "metadatas" and "documents". This is verified by:

  • The base class in vectorstore.py defines it returns List[dict]
  • Test file shows expected structure with "metadatas" containing page information
  • Multiple usages in process_queue.py consistently access these fields
  • The implementation in ChromaDB class maintains this contract
🏁 Scripts executed

The following scripts were executed for the analysis:

Script:

#!/bin/bash
# Description: Verify the keys returned by get_relevant_docs

# Test: Print the keys of the returned dictionary
python -c "
from app.vectorstore.chroma import ChromaDB
extract_vectorstore = ChromaDB('panda-etl-extraction-${project_id}')
extraction_docs = extract_vectorstore.get_relevant_docs('${chat_request.query}', k=${settings.chat_extraction_max_docs})
print(extraction_docs.keys())
"

Length of output: 331


Script:

#!/bin/bash
# Let's examine the implementation of get_relevant_docs method
ast-grep --pattern 'def get_relevant_docs'

# Also search for its usage patterns
rg "get_relevant_docs" -A 3

Length of output: 4573

backend/app/processing/process_queue.py (1)

49-51: LGTM

Extracting project_id and filename from the process and process_step objects is appropriate for the subsequent processing steps.

Comment on lines +29 to +31
# Extraction References for chat
chat_extraction_doc_threshold: float = 0.5
chat_extraction_max_docs: int = 50
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🛠️ Refactor suggestion

Consider adding value validation for the new parameters.

While the default values are reasonable, it would be beneficial to add validation to ensure:

  • chat_extraction_doc_threshold stays between 0 and 1
  • chat_extraction_max_docs remains positive

You can use pydantic's validators to enforce these constraints:

from pydantic import validator

class Settings(BaseSettings):
    # ... existing code ...

    @validator("chat_extraction_doc_threshold")
    def validate_threshold(cls, v):
        if not 0 <= v <= 1:
            raise ValueError("chat_extraction_doc_threshold must be between 0 and 1")
        return v

    @validator("chat_extraction_max_docs")
    def validate_max_docs(cls, v):
        if v <= 0:
            raise ValueError("chat_extraction_max_docs must be positive")
        return v

Comment on lines +36 to +38
<ErrorBoundary fallbackUI={GlobalErrorFallback}>
<ReactQueryClientProvider>
<Toaster position="top-right" />
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🛠️ Refactor suggestion

Consider specific error handling for React Query errors

While the ErrorBoundary will catch React Query errors, consider adding a specific error handler for query errors using React Query's onError global configuration.

// In ReactQueryClientProvider.tsx
const queryClient = new QueryClient({
  defaultOptions: {
    queries: {
      onError: (error) => {
        // Log to Rollbar with specific context
        rollbar.error('Query Error', error, {
          context: 'React Query'
        });
      }
    }
  }
});

Comment on lines +12 to +15
const rollbarConfig = {
accessToken: process.env.NEXT_PUBLIC_ROLLBAR_ACCESS_TOKEN,
environment: process.env.NODE_ENV ?? "production",
};
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🛠️ Refactor suggestion

Add type safety and review environment fallback

Two suggestions for improvement:

  1. Consider adding TypeScript interface for the Rollbar configuration.
  2. The default fallback to "production" environment could be risky. Consider using a more restrictive fallback or throwing an error if NODE_ENV is not set.
+interface RollbarConfig {
+  accessToken: string | undefined;
+  environment: string;
+}
+
-const rollbarConfig = {
+const rollbarConfig: RollbarConfig = {
   accessToken: process.env.NEXT_PUBLIC_ROLLBAR_ACCESS_TOKEN,
-  environment: process.env.NODE_ENV ?? "production",
+  environment: process.env.NODE_ENV ?? "development",
};
📝 Committable suggestion

‼️ IMPORTANT
Carefully review the code before committing. Ensure that it accurately replaces the highlighted code, contains no missing lines, and has no issues with indentation. Thoroughly test & benchmark the code to ensure it meets the requirements.

Suggested change
const rollbarConfig = {
accessToken: process.env.NEXT_PUBLIC_ROLLBAR_ACCESS_TOKEN,
environment: process.env.NODE_ENV ?? "production",
};
interface RollbarConfig {
accessToken: string | undefined;
environment: string;
}
const rollbarConfig: RollbarConfig = {
accessToken: process.env.NEXT_PUBLIC_ROLLBAR_ACCESS_TOKEN,
environment: process.env.NODE_ENV ?? "development",
};

Comment on lines +35 to +42
<Provider config={rollbarConfig}>
<ErrorBoundary fallbackUI={GlobalErrorFallback}>
<ReactQueryClientProvider>
<Toaster position="top-right" />
{children}
</ReactQueryClientProvider>
</ErrorBoundary>
</Provider>
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🛠️ Refactor suggestion

Consider additional Rollbar configuration options

The basic Rollbar setup is good, but consider adding these recommended configuration options for better error tracking:

  • captureUncaught: to capture unhandled exceptions
  • captureUnhandledRejections: for promise rejections
  • payload: to include version and environment data
const rollbarConfig: RollbarConfig = {
  accessToken: process.env.NEXT_PUBLIC_ROLLBAR_ACCESS_TOKEN,
  environment: process.env.NODE_ENV ?? "development",
+  captureUncaught: true,
+  captureUnhandledRejections: true,
+  payload: {
+    client: {
+      javascript: {
+        code_version: process.env.NEXT_PUBLIC_APP_VERSION,
+        source_map_enabled: true,
+      }
+    }
+  }
};

Committable suggestion was skipped due to low confidence.

Comment on lines +21 to +30
const pathname = usePathname();
const [initialPathname, setInitialPathname] = useState<string | null>(null);

useEffect(() => {
if (initialPathname === null) {
setInitialPathname(pathname);
} else if (pathname !== initialPathname && error) {
resetError();
}
}, [pathname, initialPathname, error, resetError]);
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🛠️ Refactor suggestion

Simplify pathname tracking logic to prevent potential race conditions.

The current implementation using initialPathname state could be simplified to avoid potential race conditions during rapid navigation changes.

Consider this alternative implementation:

-  const [initialPathname, setInitialPathname] = useState<string | null>(null);
+  const [previousPathname, setPreviousPathname] = useState(pathname);

   useEffect(() => {
-    if (initialPathname === null) {
-      setInitialPathname(pathname);
-    } else if (pathname !== initialPathname && error) {
+    if (pathname !== previousPathname && error) {
       resetError();
+      setPreviousPathname(pathname);
     }
-  }, [pathname, initialPathname, error, resetError]);
+  }, [pathname, previousPathname, error, resetError]);
📝 Committable suggestion

‼️ IMPORTANT
Carefully review the code before committing. Ensure that it accurately replaces the highlighted code, contains no missing lines, and has no issues with indentation. Thoroughly test & benchmark the code to ensure it meets the requirements.

Suggested change
const pathname = usePathname();
const [initialPathname, setInitialPathname] = useState<string | null>(null);
useEffect(() => {
if (initialPathname === null) {
setInitialPathname(pathname);
} else if (pathname !== initialPathname && error) {
resetError();
}
}, [pathname, initialPathname, error, resetError]);
const pathname = usePathname();
const [previousPathname, setPreviousPathname] = useState(pathname);
useEffect(() => {
if (pathname !== previousPathname && error) {
resetError();
setPreviousPathname(pathname);
}
}, [pathname, previousPathname, error, resetError]);

Comment on lines +68 to +85
extract_vectorstore = ChromaDB(f"panda-etl-extraction-{project_id}",
similarity_threshold=settings.chat_extraction_doc_threshold)

# Extract reference documents from the extraction results from db
extraction_docs = extract_vectorstore.get_relevant_docs(
chat_request.query,
k=settings.chat_extraction_max_docs
)

# Append text from single documents together
for extraction_doc in extraction_docs["metadatas"][0]:
index = next((i for i, item in enumerate(ordered_file_names) if item == extraction_doc["filename"]), None)
if index is None:
ordered_file_names.append(extraction_doc["filename"])
docs.append(extraction_doc["reference"])
else:
docs[index] = f'{extraction_doc["reference"]}\n\n{docs[index]}'

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⚠️ Potential issue

Add error handling for potential exceptions

The new code block does not account for possible exceptions such as KeyError or AttributeError that may arise from accessing dictionary keys or list indices. To ensure robustness, include error handling around these operations.

Wrap the code in a try-except block or validate the data before accessing it. For example:

for extraction_doc in extraction_docs.get("metadatas", []):
    if "filename" in extraction_doc and "reference" in extraction_doc:
        # Proceed with processing
    else:
        # Handle missing keys appropriately

Comment on lines +68 to +69
extract_vectorstore = ChromaDB(f"panda-etl-extraction-{project_id}",
similarity_threshold=settings.chat_extraction_doc_threshold)
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⚠️ Potential issue

Specify persist_directory when initializing ChromaDB

When creating the extract_vectorstore, you should specify the persist_directory to ensure that the vector store points to the correct data location. Without it, ChromaDB might not load the expected data, leading to inconsistencies.

Apply this diff to include the persist_directory:

 extract_vectorstore = ChromaDB(
     f"panda-etl-extraction-{project_id}",
+    persist_directory=settings.persist_directory,
     similarity_threshold=settings.chat_extraction_doc_threshold
 )
📝 Committable suggestion

‼️ IMPORTANT
Carefully review the code before committing. Ensure that it accurately replaces the highlighted code, contains no missing lines, and has no issues with indentation. Thoroughly test & benchmark the code to ensure it meets the requirements.

Suggested change
extract_vectorstore = ChromaDB(f"panda-etl-extraction-{project_id}",
similarity_threshold=settings.chat_extraction_doc_threshold)
extract_vectorstore = ChromaDB(f"panda-etl-extraction-{project_id}",
persist_directory=settings.persist_directory,
similarity_threshold=settings.chat_extraction_doc_threshold)

Comment on lines +79 to +84
index = next((i for i, item in enumerate(ordered_file_names) if item == extraction_doc["filename"]), None)
if index is None:
ordered_file_names.append(extraction_doc["filename"])
docs.append(extraction_doc["reference"])
else:
docs[index] = f'{extraction_doc["reference"]}\n\n{docs[index]}'
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🛠️ Refactor suggestion

Optimize filename lookup by using a dictionary

The current method of finding the index using a list comprehension has a time complexity of O(n). For better performance, consider using a dictionary to map filenames to their indices.

Refactor the code as follows:

+# Create a mapping from filename to index for quick lookup
+filename_to_index = {filename: idx for idx, filename in enumerate(ordered_file_names)}

 for extraction_doc in extraction_docs["metadatas"]:
-    index = next((i for i, item in enumerate(ordered_file_names) if item == extraction_doc["filename"]), None)
+    index = filename_to_index.get(extraction_doc["filename"])

     if index is None:
         ordered_file_names.append(extraction_doc["filename"])
         docs.append(extraction_doc["reference"])
+        # Update the mapping with the new filename and index
+        filename_to_index[extraction_doc["filename"]] = len(ordered_file_names) - 1
     else:
         docs[index] = f'{extraction_doc["reference"]}\n\n{docs[index]}'

Committable suggestion was skipped due to low confidence.

Comment on lines +88 to +96
# vectorize extraction result
try:
vectorize_extraction_process_step(project_id=project_id,
process_step_id=process_step_id,
filename=filename,
references=data["context"])
except Exception :
logger.error(f"Failed to vectorize extraction results for chat {traceback.format_exc()}")

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⚠️ Potential issue

Avoid catching broad exceptions

Catching all exceptions with except Exception can make debugging difficult and may mask unexpected errors. It's better to catch specific exceptions or re-raise the original exception after logging.

Consider modifying the exception handling as follows:

 try:
     vectorize_extraction_process_step(project_id=project_id,
                                     process_step_id=process_step_id,
                                     filename=filename,
                                     references=data["context"])
-except Exception:
+except SomeSpecificException as e:
     logger.error(f"Failed to vectorize extraction results: {traceback.format_exc()}")
+    raise e

Replace SomeSpecificException with the specific exception(s) that vectorize_extraction_process_step might raise. If you need to handle multiple exceptions, you can list them in a tuple.

Committable suggestion was skipped due to low confidence.

Comment on lines +375 to +409
def vectorize_extraction_process_step(project_id: int, process_step_id: int, filename: str, references: dict) -> None:
# Vectorize extraction result and dump in database
field_references = {}

# Loop to concatenate sources for each reference
for extraction_references in references:
for extraction_reference in extraction_references:
sources = extraction_reference.get("sources", [])
if sources:
sources_catenated = "\n".join(sources)
field_references.setdefault(extraction_reference["name"], "")
field_references[extraction_reference["name"]] += (
"\n" + sources_catenated if field_references[extraction_reference["name"]] else sources_catenated
)

# Only proceed if there are references to add
if not field_references:
return

# Initialize Vectorstore
vectorstore = ChromaDB(f"panda-etl-extraction-{project_id}")

docs = [f"{filename} {key}" for key in field_references]
metadatas = [
{
"project_id": project_id,
"process_step_id": process_step_id,
"filename": filename,
"reference": reference
}
for reference in field_references.values()
]

# Add documents to vectorstore
vectorstore.add_docs(docs=docs, metadatas=metadatas)
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⚠️ Potential issue

Fix incorrect assignment of documents and metadata in vectorization

Currently, the docs variable contains filename and key, which are not the actual content to be vectorized. The metadatas assign the concatenated sources to the reference field, which may not be intended. This could lead to incorrect data being stored in the vector store.

Apply this diff to correct the assignments:

 # Build docs and metadatas
-def vectorize_extraction_process_step(project_id: int, process_step_id: int, filename: str, references: dict) -> None:
-    # ... [existing code] ...
-    # Initialize Vectorstore
-    vectorstore = ChromaDB(f"panda-etl-extraction-{project_id}")
-
-    docs = [f"{filename} {key}" for key in field_references]
-    metadatas = [
-        {
-            "project_id": project_id,
-            "process_step_id": process_step_id,
-            "filename": filename,
-            "reference": reference
-        }
-        for reference in field_references.values()
-    ]
+    # Initialize Vectorstore
+    vectorstore = ChromaDB(f"panda-etl-extraction-{project_id}")
+
+    docs = list(field_references.values())
+    metadatas = [
+        {
+            "project_id": project_id,
+            "process_step_id": process_step_id,
+            "filename": filename,
+            "reference_name": key
+        }
+        for key in field_references.keys()
+    ]

Explanation:

  • Docs Correction: docs should contain the concatenated sources (field_references.values()), which are the actual content to be vectorized.
  • Metadata Correction: In metadatas, use key (the reference name) for the reference_name field to accurately describe the metadata associated with each document.

Ensure that docs and metadatas are correctly aligned so that each document corresponds to the correct metadata entry.

Committable suggestion was skipped due to low confidence.

@gventuri gventuri merged commit c2d7bed into main Oct 29, 2024
5 checks passed
@gventuri gventuri deleted the release/v0.3.3 branch October 29, 2024 17:39
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3 participants