adding poppunk version 2.7.5

[erinyoung]

There's a new version of poppunk! (Actually there's been a few)

According to the release notes there is more efficient visualization and some fixes. Among other things.

I copied the files from 2.6.5, added a CMD line, updated the base to mambaorg/micromamba:2.0.5-ubuntu22.04, added a cmp line to after the test, and changed as to AS for my linter.

The full diff:

$ diff build-files/poppunk/2.6.5/Dockerfile build-files/poppunk/2.7.5/Dockerfile 
1c1
< FROM mambaorg/micromamba:1.5.6 as app
---
> FROM mambaorg/micromamba:2.0.5-ubuntu22.04 AS app
5c5
< ARG POPPUNK_VERSION="2.6.5"
---
> ARG POPPUNK_VERSION="2.7.5"
12c12
< LABEL base.image="mambaorg/micromamba:1.5.6"
---
> LABEL base.image="mambaorg/micromamba:2.0.5-ubuntu22.04"
39a40,41
> CMD ["poppunk", "--help"]
> 
44c46
< FROM app as test
---
> FROM app AS test
61c63
< RUN bash test.sh
---
> RUN bash test.sh && cmp assigned.csv database.csv

Pull Request (PR) checklist:

• Include a description of what is in this pull request in this message.
• The dockerfile successfully builds to a test target for the user creating the PR. (i.e. docker build --tag samtools:1.15test --target test docker-builds/build-files/samtools/1.15 )
• Directory structure as name of the tool in lower case with special characters removed with a subdirectory of the version number in build-files (i.e. docker-builds/build-files/spades/3.12.0/Dockerfile)
  • (optional) All test files are located in same directory as the Dockerfile (i.e. build-files/shigatyper/2.0.1/test.sh)
• Create a simple container-specific README.md in the same directory as the Dockerfile (i.e. docker-builds/build-files/spades/3.12.0/README.md)
  • If this README is longer than 30 lines, there is an explanation as to why more detail was needed
• Dockerfile includes the recommended LABELS
• Main README.md has been updated to include the tool and/or version of the dockerfile(s) in this PR
• Program_Licenses.md contains the tool(s) used in this PR and has been updated for any missing