A simple prototype testing the capabilities of Dash + Plotly
The grouper-prototype notebook spawns a Dash app that allows the user to view and group individual trajectories for the result of a single GillesPy2 ensemble simulation. The "Assign to group" dropdown will place the trajectory into one of several groups (5 by default, this can be changed in cell 2).
The second section of the interface shows the mean value of each species in the group trajectories.
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Python 3 (virtual environment recommended)
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pip install -r requirements.txt -
jupyter lab -
Got to server link
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Open grouper-prototype.ipynb
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Run -> Run All Cells
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Check new tab to see results