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Improvements and completion of evaluation/generation scripts #89

Merged
merged 20 commits into from
Aug 22, 2024
Merged

Improvements and completion of evaluation/generation scripts #89

merged 20 commits into from
Aug 22, 2024

Commits on Jul 16, 2024

  1. minor correction in header

    @KrisThielemans
    KrisThielemans committed Jul 16, 2024
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  2. update BSREM ref generation scripts

    @KrisThielemans
    KrisThielemans committed Jul 16, 2024
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  3. OSEM check Vision600_thorax

    @KrisThielemans
    KrisThielemans committed Jul 16, 2024
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  4. plot BSREM metrics

    @KrisThielemans
    KrisThielemans committed Jul 16, 2024
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  5. OSEM NeuroLF_Hoffman and mMR_NEMA_IQ check-in

    @KrisThielemans
    KrisThielemans committed Jul 16, 2024
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  6. add Siemens_Vision600_thorax_VOI_prep.sh

    @KrisThielemans
    KrisThielemans committed Jul 16, 2024
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  7. add NeuroLF_VOIs.py

    @KrisThielemans
    KrisThielemans committed Jul 16, 2024
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  8. add Siemens_mMR_NEMA_VOIs.py

    @KrisThielemans
    KrisThielemans committed Jul 16, 2024
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  9. add __init.py__

    @KrisThielemans
    KrisThielemans committed Jul 16, 2024
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Commits on Aug 21, 2024

  1. Merge branch 'main' into kris_eval

    @KrisThielemans
    KrisThielemans committed Aug 21, 2024
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  2. white-space

    @KrisThielemans
    KrisThielemans committed Aug 21, 2024
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  3. moved data-set specific files to subfolders

    @KrisThielemans
    KrisThielemans committed Aug 21, 2024
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  4. reduce overlap in evaluation scripts 

    - move comment evaluation settings to dataset_settings
- create run_OSEM.py and run_BSREM.py that should work for all datasets
    @KrisThielemans
    KrisThielemans committed Aug 21, 2024
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  5. some corrections in VOI conversion scripts

    @KrisThielemans
    KrisThielemans committed Aug 21, 2024
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  6. Merge remote-tracking branch 'origin/main' into kris_eval

    @KrisThielemans
    KrisThielemans committed Aug 21, 2024
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  7. updates to README

    @KrisThielemans
    KrisThielemans committed Aug 21, 2024
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  8. remove some user-specific paths

    @KrisThielemans
    KrisThielemans committed Aug 21, 2024
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  9. use correct name for folder of NeuroLF data

    @KrisThielemans
    KrisThielemans committed Aug 21, 2024
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Commits on Aug 22, 2024

  1. lint

    @casperdcl
    casperdcl committed Aug 22, 2024
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  2. import & module tidy

    @casperdcl
    casperdcl committed Aug 22, 2024
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