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# Release summary | ||
This is a path release (v1.5.1) that fixes the error with `donttest{}` examples in `fai_blup()` function. I was confusing about the origin of the error because in the last submission (v1.5.0) when I ran `R CMD check --as-cran --run-donttest metan_1.5.0.tar.gz`, no error message was generated. Please, see the results below. | ||
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```r{} | ||
* using log directory 'D:/Desktop/metan/metan.Rcheck' | ||
* using R version 3.6.2 (2019-12-12) | ||
* using platform: x86_64-w64-mingw32 (64-bit) | ||
* using session charset: ISO8859-1 | ||
* using options '--run-donttest --as-cran' | ||
* checking for file 'metan/DESCRIPTION' ... OK | ||
* checking extension type ... Package | ||
* this is package 'metan' version '1.5.0' | ||
* package encoding: UTF-8 | ||
* checking CRAN incoming feasibility ... WARNING | ||
Maintainer: 'Tiago Olivoto <[email protected]>' | ||
Insufficient package version (submitted: 1.5.0, existing: 1.5.0) | ||
Days since last update: 1 | ||
* checking package namespace information ... OK | ||
* checking package dependencies ... OK | ||
* checking if this is a source package ... OK | ||
* checking if there is a namespace ... OK | ||
* checking for .dll and .exe files ... OK | ||
* checking for hidden files and directories ... OK | ||
* checking for portable file names ... OK | ||
* checking whether package 'metan' can be installed ... OK | ||
* checking package directory ... OK | ||
* checking for future file timestamps ... OK | ||
* checking 'build' directory ... OK | ||
* checking DESCRIPTION meta-information ... OK | ||
* checking top-level files ... OK | ||
* checking for left-over files ... OK | ||
* checking index information ... OK | ||
* checking package subdirectories ... OK | ||
* checking R files for non-ASCII characters ... OK | ||
* checking R files for syntax errors ... OK | ||
* checking whether the package can be loaded ... OK | ||
* checking whether the package can be loaded with stated dependencies ... OK | ||
* checking whether the package can be unloaded cleanly ... OK | ||
* checking whether the namespace can be loaded with stated dependencies ... OK | ||
* checking whether the namespace can be unloaded cleanly ... OK | ||
* checking loading without being on the library search path ... OK | ||
* checking use of S3 registration ... OK | ||
* checking dependencies in R code ... OK | ||
* checking S3 generic/method consistency ... OK | ||
* checking replacement functions ... OK | ||
* checking foreign function calls ... OK | ||
* checking R code for possible problems ... OK | ||
* checking Rd files ... OK | ||
* checking Rd metadata ... OK | ||
* checking Rd line widths ... OK | ||
* checking Rd cross-references ... OK | ||
* checking for missing documentation entries ... OK | ||
* checking for code/documentation mismatches ... OK | ||
* checking Rd \usage sections ... OK | ||
* checking Rd contents ... OK | ||
* checking for unstated dependencies in examples ... OK | ||
* checking contents of 'data' directory ... OK | ||
* checking data for non-ASCII characters ... OK | ||
* checking data for ASCII and uncompressed saves ... OK | ||
* checking installed files from 'inst/doc' ... OK | ||
* checking files in 'vignettes' ... OK | ||
* checking examples ... NOTE | ||
Examples with CPU or elapsed time > 5s | ||
user system elapsed | ||
corr_plot 44.14 0.08 45.48 | ||
cv_ammi 12.11 0.00 12.35 | ||
cv_ammif 11.59 0.01 11.81 | ||
get_model_data 10.84 0.05 11.31 | ||
waasb 10.02 0.06 10.95 | ||
desc_stat 7.82 0.02 7.97 | ||
clustering 6.99 0.01 7.25 | ||
waas 5.86 0.02 6.34 | ||
* checking for unstated dependencies in vignettes ... OK | ||
* checking package vignettes in 'inst/doc' ... OK | ||
* checking re-building of vignette outputs ... OK | ||
* checking PDF version of manual ... OK | ||
* checking for detritus in the temp directory ... OK | ||
* DONE | ||
Status: 1 WARNING, 1 NOTE | ||
``` | ||
I just realized that the error in `fai_blup()` example occurred because I used a data set with a non-significant genotype effect to compute an index that requires a significant genotype effect for all traits. Now, the correct data set is used in that example. I'd like to thank Brian D. Ripley for his kind e-mail alerting me about this error. | ||
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This is a minor release (v1.6.0) that inclues new features and some minor improvements. Please, see the `news.md` file for more details. | ||
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# Test environments | ||
- local OS X install, R 3.6.3 | ||
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