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v1.5.0

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@TiagoOlivoto TiagoOlivoto released this 12 Apr 23:56
· 465 commits to master since this release

New functions

  • select_rows_na() and select_cols_na() to select rows or columns with with NA values.
  • mgidi() to compute the multi-trait genotype-ideotype distance index.
  • plot_bars() to create bar plots quickly. Thanks to @MariaDiel for her suggestion.

Minor changes

  • Deprecated functions hm_mean() and gm_mean() removed in favour of hmean() and gmean(), respectively.
  • Deprecated argument rep retired in Fox(), ge_effects(), Huehn(), resp_surf(), superiority(), and Thennarasu()
  • Deprecated argument verbose retired in anova_ind()
  • Deprecated argument region retired in resp_surf()
  • Remove dependency on dendextend by using ggplot2-based graphics in plot.wsmp().
  • Update package site with pkgdown v1.5.0.
  • Update documentation in ge_plot()
  • Allow using fai_blup() with gamem()
  • Improve checking process with inspect()
  • Improve feedback for results, indicating random and fixed effects. Thanks to @NelsonJunior for his suggestion.
  • plot() call on objects of class gamem, waasb and waas now returns the variable names automatically. Thanks to @MdFarhad for suggesting me this change.
  • plot.gamem() and plot.waasb() have a new argument (type = "vcomp") to produce a plot showing the contribution of the variance components to the phenotypic variance
  • cv_ammi(), cv_ammif(), and cv_blup() now check for missing values and unbalanced data before computing the cross-validation. (#3)

Bug fixes

  • Fix problems from a recent upgrade of package tibble to version 3.0.0.
  • get_model_data() now fills rows that don't matches across columns with NA. Thanks to @MdFarhad for his report.
  • get_model_data() called now report mean squares, F-calculated and P-values for blocks within replicates in anova_ind().