rate-code-eff-2019

Supporting code for The effect of inhibition on rate code efficiency indicators

Repositary structure

• coding
  • computation - files for running the simulation and generating data
    • transition_scan.py - generates raw simulation data
    • transform_list_results.py - processes raw simulation data and computes the transition rates. Creates the file transition_rates.pkl
  • optimization - contains algorithms for maximizing mutual information
  • analysis - plotting utilities and framework for information channels
• analysis - Jupyter notebooks used for creating the plots in the manuscript