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Testing GHA #500

Closed

penelopeysm wants to merge 26 commits into master from pysm/test-gha-suggestions

Member

penelopeysm commented Aug 12, 2024 •

edited

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please ignore - this branch contains spurious version number changes so that I can check that the PR suggestions work :)

penelopeysm added 14 commits

July 28, 2024 12:39


          Gitignore Python venv and other temporary files

e107607


          Fix typo in versions.sh script

5dd5472


          Use single Project.toml for entire repo

99a9694


          Include Manifest hashes in GHA cache key

51ad1fd

Closes #496


          Fix caching in PR preview workflow as well

6c3118e


          Generate Manifest.toml before hashing it

c1b3f47


          Add temp workflow to regenerate docs for #497

d34c745


          Revert "Add temp workflow to regenerate docs for #497"

8c4eae7

This reverts commit d34c745.


          Expand version check script

40e6e13

The action now:

 - runs on all PRs to main / backport branches
 - runs on pushes to main / backport branches

It always checks that the version of Turing in Project.toml matches that
in _quarto.yml.

Additionally, if the PR is targeted at main / the push is to the main
branch, it also checks that the version of Turing matches the latest
release on GitHub.


          Don't ignore Manifest, update deps

90909ef


          Check Manifest file in GHA as well

42e664f


          Instantiate project environment in publish workflow

c0c2cd2


          Attempt to edit GHA to suggest updated version in PRs

c931188


          fake branch to test GHA

4a0b047

Contributor

github-actions bot commented Aug 12, 2024

Preview the changes: https://turinglang.org/docs/pr-previews/500
Please avoid using the search feature and navigation bar in PR previews!

penelopeysm added 4 commits

August 13, 2024 00:11


          Pick up envvar

902995a


          fix path to update

63a976b


          fix path

5e2a89b


          Disable precomp

267a27e

Member Author

penelopeysm commented Aug 12, 2024

In principle it works, but it's clearly a bit confused with the diffs in the Manifest.

Will come back to this soon...


          Temporarily disable Manifest checking

808a2f5

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          Try reviewdog/action-suggester

5c4e9d1

github-actions bot reviewed

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          Re-enable Manifest updating

b847fc3

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Remaining comments which cannot be posted as a review comment to avoid GitHub Rate Limit

check-turing-version-consistency

[check-turing-version-consistency] _{reported by reviewdog 🐶}

docs/Manifest.toml

Lines 828 to 830 in b847fc3

    
           EnzymeBFloat16sExt = "BFloat16s" 
        
           EnzymeChainRulesCoreExt = "ChainRulesCore" 
        
           EnzymeLogExpFunctionsExt = "LogExpFunctions"

[check-turing-version-consistency] _{reported by reviewdog 🐶}

docs/Manifest.toml

Lines 832 to 839 in b847fc3

    
           EnzymeStaticArraysExt = "StaticArrays" 
        
           [deps.Enzyme.weakdeps] 
        
           BFloat16s = "ab4f0b2a-ad5b-11e8-123f-65d77653426b" 
        
           ChainRulesCore = "d360d2e6-b24c-11e9-a2a3-2a2ae2dbcce4" 
        
           LogExpFunctions = "2ab3a3ac-af41-5b50-aa03-7779005ae688" 
        
           SpecialFunctions = "276daf66-3868-5448-9aa4-cd146d93841b" 
        
           StaticArrays = "90137ffa-7385-5640-81b9-e52037218182"

[check-turing-version-consistency] _{reported by reviewdog 🐶}

docs/Manifest.toml

Line 842 in b847fc3

git-tree-sha1 = "8f205a601760f4798a10f138c3940f0451d95188"

[check-turing-version-consistency] _{reported by reviewdog 🐶}

docs/Manifest.toml

Line 844 in b847fc3

version = "0.7.8"

[check-turing-version-consistency] _{reported by reviewdog 🐶}

docs/Manifest.toml

Line 852 in b847fc3

git-tree-sha1 = "7fc2bc158446ff552092e239750244e13566c451"

[check-turing-version-consistency] _{reported by reviewdog 🐶}

docs/Manifest.toml

Line 854 in b847fc3

version = "0.0.143+0"

[check-turing-version-consistency] _{reported by reviewdog 🐶}

docs/Manifest.toml

Lines 885 to 890 in b847fc3

    
           [[deps.Expronicon]] 
        
           deps = ["MLStyle", "Pkg", "TOML"] 
        
           git-tree-sha1 = "fc3951d4d398b5515f91d7fe5d45fc31dccb3c9b" 
        
           uuid = "6b7a57c9-7cc1-4fdf-b7f5-e857abae3636" 
        
           version = "0.8.5"

[check-turing-version-consistency] _{reported by reviewdog 🐶}

docs/Manifest.toml

Lines 932 to 937 in b847fc3

    
           [[deps.FastAlmostBandedMatrices]] 
        
           deps = ["ArrayInterface", "ArrayLayouts", "BandedMatrices", "ConcreteStructs", "LazyArrays", "LinearAlgebra", "MatrixFactorizations", "PrecompileTools", "Reexport"] 
        
           git-tree-sha1 = "a92b5820ea38da3b50b626cc55eba2b074bb0366" 
        
           uuid = "9d29842c-ecb8-4973-b1e9-a27b1157504e" 
        
           version = "0.1.3"

[check-turing-version-consistency] _{reported by reviewdog 🐶}

docs/Manifest.toml

Line 940 in b847fc3

git-tree-sha1 = "ab1b34570bcdf272899062e1a56285a53ecaae08"

[check-turing-version-consistency] _{reported by reviewdog 🐶}

docs/Manifest.toml

Line 942 in b847fc3

version = "0.3.5"

[check-turing-version-consistency] _{reported by reviewdog 🐶}

docs/Manifest.toml

Lines 983 to 984 in b847fc3

    
           deps = ["ArrayInterface", "LinearAlgebra", "Setfield", "SparseArrays"] 
        
           git-tree-sha1 = "f9219347ebf700e77ca1d48ef84e4a82a6701882"

[check-turing-version-consistency] _{reported by reviewdog 🐶}

docs/Manifest.toml

Line 986 in b847fc3

version = "2.24.0"

[check-turing-version-consistency] _{reported by reviewdog 🐶}

docs/Manifest.toml

Line 1006 in b847fc3

git-tree-sha1 = "a3aa4744279a4c84e4ebb3751b25d5c65445e77c"

[check-turing-version-consistency] _{reported by reviewdog 🐶}

docs/Manifest.toml

Line 1008 in b847fc3

version = "0.14.18"

[check-turing-version-consistency] _{reported by reviewdog 🐶}

docs/Manifest.toml

Line 1014 in b847fc3

FluxEnzymeExt = "Enzyme"

[check-turing-version-consistency] _{reported by reviewdog 🐶}

docs/Manifest.toml

Line 1020 in b847fc3

Enzyme = "7da242da-08ed-463a-9acd-ee780be4f1d9"

[check-turing-version-consistency] _{reported by reviewdog 🐶}

docs/Manifest.toml

Line 1110 in b847fc3

git-tree-sha1 = "a74c3f1cf56a3dfcdef0605f8cdb7015926aae30"

[check-turing-version-consistency] _{reported by reviewdog 🐶}

docs/Manifest.toml

Line 1112 in b847fc3

version = "10.3.0"

[check-turing-version-consistency] _{reported by reviewdog 🐶}

docs/Manifest.toml

Line 1118 in b847fc3

version = "0.1.6"

[check-turing-version-consistency] _{reported by reviewdog 🐶}

docs/Manifest.toml

Lines 1121 to 1122 in b847fc3

    
           deps = ["ExprTools", "InteractiveUtils", "LLVM", "Libdl", "Logging", "Preferences", "Scratch", "Serialization", "TOML", "TimerOutputs", "UUIDs"] 
        
           git-tree-sha1 = "ab29216184312f99ff957b32cd63c2fe9c928b91"

[check-turing-version-consistency] _{reported by reviewdog 🐶}

docs/Manifest.toml

Line 1124 in b847fc3

version = "0.26.7"

[check-turing-version-consistency] _{reported by reviewdog 🐶}

docs/Manifest.toml

Lines 1209 to 1218 in b847fc3

    
           [[deps.Hwloc]] 
        
           deps = ["CEnum", "Hwloc_jll", "Printf"] 
        
           git-tree-sha1 = "6a3d80f31ff87bc94ab22a7b8ec2f263f9a6a583" 
        
           uuid = "0e44f5e4-bd66-52a0-8798-143a42290a1d" 
        
           version = "3.3.0" 
        
           weakdeps = ["AbstractTrees"] 
        
               [deps.Hwloc.extensions] 
        
               HwlocTrees = "AbstractTrees"

[check-turing-version-consistency] _{reported by reviewdog 🐶}

docs/Manifest.toml

Lines 1363 to 1364 in b847fc3

    
           deps = ["ArrayInterface", "DataStructures", "DiffEqBase", "DocStringExtensions", "FunctionWrappers", "Graphs", "LinearAlgebra", "Markdown", "PoissonRandom", "Random", "RandomNumbers", "RecursiveArrayTools", "Reexport", "SciMLBase", "StaticArrays", "SymbolicIndexingInterface", "UnPack"] 
        
           git-tree-sha1 = "f8235862db5cf813a52859ff82205d0f22f09a64"

[check-turing-version-consistency] _{reported by reviewdog 🐶}

docs/Manifest.toml

Line 1366 in b847fc3

version = "9.13.3"

[check-turing-version-consistency] _{reported by reviewdog 🐶}

docs/Manifest.toml

Line 1369 in b847fc3

[[deps.KLU]]

[check-turing-version-consistency] _{reported by reviewdog 🐶}

docs/Manifest.toml

Line 1371 in b847fc3

git-tree-sha1 = "07649c499349dad9f08dde4243a4c597064663e9"

[check-turing-version-consistency] _{reported by reviewdog 🐶}

docs/Manifest.toml

Line 1377 in b847fc3

git-tree-sha1 = "0fac59881e91c7233a9b0d47f4b7d9432e534f0f"

[check-turing-version-consistency] _{reported by reviewdog 🐶}

docs/Manifest.toml

Line 1379 in b847fc3

version = "0.9.23"

[check-turing-version-consistency] _{reported by reviewdog 🐶}

docs/Manifest.toml

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           [[deps.LBFGSB]] 
        
           deps = ["L_BFGS_B_jll"] 
        
           git-tree-sha1 = "e2e6f53ee20605d0ea2be473480b7480bd5091b5" 
        
           uuid = "5be7bae1-8223-5378-bac3-9e7378a2f6e6" 
        
           version = "0.4.1"

[check-turing-version-consistency] _{reported by reviewdog 🐶}

docs/Manifest.toml

Line 1423 in b847fc3

git-tree-sha1 = "2470e69781ddd70b8878491233cd09bc1bd7fc96"

[check-turing-version-consistency] _{reported by reviewdog 🐶}

docs/Manifest.toml

Line 1425 in b847fc3

version = "8.1.0"

[check-turing-version-consistency] _{reported by reviewdog 🐶}

docs/Manifest.toml

Line 1435 in b847fc3

git-tree-sha1 = "597d1c758c9ae5d985ba4202386a607c675ee700"

[check-turing-version-consistency] _{reported by reviewdog 🐶}

docs/Manifest.toml

Line 1437 in b847fc3

version = "0.0.31+0"

[check-turing-version-consistency] _{reported by reviewdog 🐶}

docs/Manifest.toml

Lines 1460 to 1465 in b847fc3

    
           [[deps.L_BFGS_B_jll]] 
        
           deps = ["Artifacts", "CompilerSupportLibraries_jll", "JLLWrappers", "Libdl", "Pkg"] 
        
           git-tree-sha1 = "77feda930ed3f04b2b0fbb5bea89e69d3677c6b0" 
        
           uuid = "81d17ec3-03a1-5e46-b53e-bddc35a13473" 
        
           version = "3.0.1+0"

[check-turing-version-consistency] _{reported by reviewdog 🐶}

docs/Manifest.toml

Lines 1623 to 1624 in b847fc3

    
           deps = ["ArrayInterface", "ChainRulesCore", "ConcreteStructs", "CpuId", "DocStringExtensions", "EnumX", "FastLapackInterface", "GPUArraysCore", "InteractiveUtils", "KLU", "Krylov", "LazyArrays", "Libdl", "LinearAlgebra", "MKL_jll", "Markdown", "PrecompileTools", "Preferences", "RecursiveFactorization", "Reexport", "SciMLBase", "SciMLOperators", "Setfield", "SparseArrays", "Sparspak", "StaticArraysCore", "UnPack"] 
        
           git-tree-sha1 = "ee625f4053362526950661ce3022c7a483c6f8e5"

[check-turing-version-consistency] _{reported by reviewdog 🐶}

docs/Manifest.toml

Line 1626 in b847fc3

version = "2.32.0"

[check-turing-version-consistency] _{reported by reviewdog 🐶}

docs/Manifest.toml

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LinearSolveBandedMatricesExt = "BandedMatrices"

[check-turing-version-consistency] _{reported by reviewdog 🐶}

docs/Manifest.toml

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           [[deps.LossFunctions]] 
        
           deps = ["Markdown", "Requires", "Statistics"] 
        
           git-tree-sha1 = "df9da07efb9b05ca7ef701acec891ee8f73c99e2" 
        
           uuid = "30fc2ffe-d236-52d8-8643-a9d8f7c094a7" 
        
           version = "0.11.1" 
        
           weakdeps = ["CategoricalArrays"] 
        
               [deps.LossFunctions.extensions] 
        
               LossFunctionsCategoricalArraysExt = "CategoricalArrays"

[check-turing-version-consistency] _{reported by reviewdog 🐶}

docs/Manifest.toml

Lines 1734 to 1735 in b847fc3

    
           deps = ["ADTypes", "Adapt", "ArgCheck", "ArrayInterface", "ChainRulesCore", "Compat", "ConcreteStructs", "ConstructionBase", "DispatchDoctor", "EnzymeCore", "FastClosures", "ForwardDiff", "Functors", "GPUArraysCore", "LinearAlgebra", "LossFunctions", "LuxCore", "LuxDeviceUtils", "LuxLib", "MacroTools", "Markdown", "NNlib", "Optimisers", "Preferences", "Random", "Reexport", "Setfield", "Statistics", "UnrolledUtilities", "WeightInitializers"] 
        
           git-tree-sha1 = "80db23a3cb1de02c82b603d10bb013e0e87e56d4"

[check-turing-version-consistency] _{reported by reviewdog 🐶}

docs/Manifest.toml

Line 1737 in b847fc3

version = "0.5.63"

[check-turing-version-consistency] _{reported by reviewdog 🐶}

docs/Manifest.toml

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LuxComponentArraysExt = "ComponentArrays"

[check-turing-version-consistency] _{reported by reviewdog 🐶}

docs/Manifest.toml

Lines 1741 to 1748 in b847fc3

    
           LuxDynamicExpressionsExt = "DynamicExpressions" 
        
           LuxEnzymeExt = "Enzyme" 
        
           LuxFluxExt = "Flux" 
        
           LuxMLUtilsExt = "MLUtils" 
        
           LuxMPIExt = "MPI" 
        
           LuxMPINCCLExt = ["CUDA", "MPI", "NCCL"] 
        
           LuxReverseDiffExt = ["FunctionWrappers", "ReverseDiff"] 
        
           LuxSimpleChainsExt = "SimpleChains"

[check-turing-version-consistency] _{reported by reviewdog 🐶}

docs/Manifest.toml

Line 1753 in b847fc3

CUDA = "052768ef-5323-5732-b1bb-66c8b64840ba"

[check-turing-version-consistency] _{reported by reviewdog 🐶}

docs/Manifest.toml

Lines 1755 to 1756 in b847fc3

    
           DynamicExpressions = "a40a106e-89c9-4ca8-8020-a735e8728b6b" 
        
           Enzyme = "7da242da-08ed-463a-9acd-ee780be4f1d9"

[check-turing-version-consistency] _{reported by reviewdog 🐶}

docs/Manifest.toml

Lines 1758 to 1761 in b847fc3

    
           FunctionWrappers = "069b7b12-0de2-55c6-9aab-29f3d0a68a2e" 
        
           MLUtils = "f1d291b0-491e-4a28-83b9-f70985020b54" 
        
           MPI = "da04e1cc-30fd-572f-bb4f-1f8673147195" 
        
           NCCL = "3fe64909-d7a1-4096-9b7d-7a0f12cf0f6b"

[check-turing-version-consistency] _{reported by reviewdog 🐶}

docs/Manifest.toml

Line 1763 in b847fc3

SimpleChains = "de6bee2f-e2f4-4ec7-b6ed-219cc6f6e9e5"

[check-turing-version-consistency] _{reported by reviewdog 🐶}

docs/Manifest.toml

Line 1769 in b847fc3

git-tree-sha1 = "f1312b4295c21e8681f8661d9893fd3ba522d7c9"

[check-turing-version-consistency] _{reported by reviewdog 🐶}

docs/Manifest.toml

Lines 1771 to 1777 in b847fc3

    
           version = "0.1.23" 
        
           weakdeps = ["ChainRulesCore", "EnzymeCore", "MLDataDevices"] 
        
               [deps.LuxCore.extensions] 
        
               LuxCoreChainRulesCoreExt = "ChainRulesCore" 
        
               LuxCoreEnzymeCoreExt = "EnzymeCore" 
        
               LuxCoreMLDataDevicesExt = "MLDataDevices"

[check-turing-version-consistency] _{reported by reviewdog 🐶}

docs/Manifest.toml

Lines 1780 to 1781 in b847fc3

    
           deps = ["Adapt", "ChainRulesCore", "Functors", "LuxCore", "Preferences", "Random", "UnrolledUtilities"] 
        
           git-tree-sha1 = "494db99a113c3a5a0b637d788a65494732f4558e"

[check-turing-version-consistency] _{reported by reviewdog 🐶}

docs/Manifest.toml

Line 1783 in b847fc3

version = "0.1.27"

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docs/Manifest.toml

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           LuxDeviceUtilsAMDGPUExt = "AMDGPU" 
        
           LuxDeviceUtilsCUDAExt = "CUDA"

[check-turing-version-consistency] _{reported by reviewdog 🐶}

docs/Manifest.toml

Line 1789 in b847fc3

LuxDeviceUtilsGPUArraysExt = "GPUArrays"

[check-turing-version-consistency] _{reported by reviewdog 🐶}

docs/Manifest.toml

Lines 1791 to 1795 in b847fc3

    
           LuxDeviceUtilsMetalExt = ["GPUArrays", "Metal"] 
        
           LuxDeviceUtilsRecursiveArrayToolsExt = "RecursiveArrayTools" 
        
           LuxDeviceUtilsReverseDiffExt = "ReverseDiff" 
        
           LuxDeviceUtilsSparseArraysExt = "SparseArrays" 
        
           LuxDeviceUtilsTrackerExt = "Tracker"

[check-turing-version-consistency] _{reported by reviewdog 🐶}

docs/Manifest.toml

Line 1797 in b847fc3

LuxDeviceUtilsoneAPIExt = ["GPUArrays", "oneAPI"]

[check-turing-version-consistency] _{reported by reviewdog 🐶}

docs/Manifest.toml

Lines 1800 to 1801 in b847fc3

    
           AMDGPU = "21141c5a-9bdb-4563-92ae-f87d6854732e" 
        
           CUDA = "052768ef-5323-5732-b1bb-66c8b64840ba"

[check-turing-version-consistency] _{reported by reviewdog 🐶}

docs/Manifest.toml

Line 1803 in b847fc3

GPUArrays = "0c68f7d7-f131-5f86-a1c3-88cf8149b2d7"

[check-turing-version-consistency] _{reported by reviewdog 🐶}

docs/Manifest.toml

Lines 1806 to 1809 in b847fc3

    
           RecursiveArrayTools = "731186ca-8d62-57ce-b412-fbd966d074cd" 
        
           ReverseDiff = "37e2e3b7-166d-5795-8a7a-e32c996b4267" 
        
           SparseArrays = "2f01184e-e22b-5df5-ae63-d93ebab69eaf" 
        
           Tracker = "9f7883ad-71c0-57eb-9f7f-b5c9e6d3789c"

[check-turing-version-consistency] _{reported by reviewdog 🐶}

docs/Manifest.toml

Line 1811 in b847fc3

oneAPI = "8f75cd03-7ff8-4ecb-9b8f-daf728133b1b"

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docs/Manifest.toml

Lines 1814 to 1815 in b847fc3

    
           deps = ["ArrayInterface", "ChainRulesCore", "Compat", "CpuId", "DispatchDoctor", "EnzymeCore", "FastClosures", "ForwardDiff", "Hwloc", "KernelAbstractions", "LinearAlgebra", "LoopVectorization", "LuxCore", "MLDataDevices", "Markdown", "NNlib", "Octavian", "Polyester", "Random", "Reexport", "SLEEFPirates", "Static", "StaticArraysCore", "Statistics", "UnrolledUtilities"] 
        
           git-tree-sha1 = "f8a0c63f8b03718dcbf6f326b864f0d2189b1350"

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docs/Manifest.toml

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version = "0.3.42"

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docs/Manifest.toml

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           LuxLibAppleAccelerateExt = "AppleAccelerate" 
        
           LuxLibBLISBLASExt = "BLISBLAS" 
        
           LuxLibCUDAExt = "CUDA" 
        
           LuxLibMKLExt = "MKL"

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docs/Manifest.toml

Line 1827 in b847fc3

LuxLibcuDNNExt = ["CUDA", "cuDNN"]

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docs/Manifest.toml

Lines 1831 to 1832 in b847fc3

    
           AppleAccelerate = "13e28ba4-7ad8-5781-acae-3021b1ed3924" 
        
           BLISBLAS = "6f275bd8-fec0-4d39-945b-7e95a765fa1e"

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docs/Manifest.toml

Line 1834 in b847fc3

MKL = "33e6dc65-8f57-5167-99aa-e5a354878fb2"

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docs/Manifest.toml

Lines 1857 to 1890 in b847fc3

    
           [[deps.MLDataDevices]] 
        
           deps = ["Adapt", "ChainRulesCore", "Functors", "Preferences", "Random", "UnrolledUtilities"] 
        
           git-tree-sha1 = "0999f1ff93d3bca8c8da74470b4c8758b3cedadf" 
        
           uuid = "7e8f7934-dd98-4c1a-8fe8-92b47a384d40" 
        
           version = "1.0.1" 
        
               [deps.MLDataDevices.extensions] 
        
               MLDataDevicesAMDGPUExt = "AMDGPU" 
        
               MLDataDevicesCUDAExt = "CUDA" 
        
               MLDataDevicesFillArraysExt = "FillArrays" 
        
               MLDataDevicesGPUArraysExt = "GPUArrays" 
        
               MLDataDevicesMetalExt = ["GPUArrays", "Metal"] 
        
               MLDataDevicesRecursiveArrayToolsExt = "RecursiveArrayTools" 
        
               MLDataDevicesReverseDiffExt = "ReverseDiff" 
        
               MLDataDevicesSparseArraysExt = "SparseArrays" 
        
               MLDataDevicesTrackerExt = "Tracker" 
        
               MLDataDevicesZygoteExt = "Zygote" 
        
               MLDataDevicescuDNNExt = ["CUDA", "cuDNN"] 
        
               MLDataDevicesoneAPIExt = ["GPUArrays", "oneAPI"] 
        
               [deps.MLDataDevices.weakdeps] 
        
               AMDGPU = "21141c5a-9bdb-4563-92ae-f87d6854732e" 
        
               CUDA = "052768ef-5323-5732-b1bb-66c8b64840ba" 
        
               FillArrays = "1a297f60-69ca-5386-bcde-b61e274b549b" 
        
               GPUArrays = "0c68f7d7-f131-5f86-a1c3-88cf8149b2d7" 
        
               Metal = "dde4c033-4e86-420c-a63e-0dd931031962" 
        
               RecursiveArrayTools = "731186ca-8d62-57ce-b412-fbd966d074cd" 
        
               ReverseDiff = "37e2e3b7-166d-5795-8a7a-e32c996b4267" 
        
               SparseArrays = "2f01184e-e22b-5df5-ae63-d93ebab69eaf" 
        
               Tracker = "9f7883ad-71c0-57eb-9f7f-b5c9e6d3789c" 
        
               Zygote = "e88e6eb3-aa80-5325-afca-941959d7151f" 
        
               cuDNN = "02a925ec-e4fe-4b08-9a7e-0d78e3d38ccd" 
        
               oneAPI = "8f75cd03-7ff8-4ecb-9b8f-daf728133b1b"

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           [[deps.MaybeInplace]] 
        
           deps = ["ArrayInterface", "LinearAlgebra", "MacroTools", "SparseArrays"] 
        
           git-tree-sha1 = "1b9e613f2ca3b6cdcbfe36381e17ca2b66d4b3a1" 
        
           uuid = "bb5d69b7-63fc-4a16-80bd-7e42200c7bdb" 
        
           version = "0.1.3"

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           deps = ["NLopt_jll"] 
        
           git-tree-sha1 = "3b887e2ef56be3309e68d2546c6178e2d2fa9a60"

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           version = "1.0.2" 
        
               [deps.NLopt.extensions] 
        
               NLoptMathOptInterfaceExt = ["MathOptInterface"] 
        
               [deps.NLopt.weakdeps] 
        
               MathOptInterface = "b8f27783-ece8-5eb3-8dc8-9495eed66fee"

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           deps = ["ADTypes", "ArrayInterface", "ConcreteStructs", "DiffEqBase", "FastBroadcast", "FastClosures", "FiniteDiff", "ForwardDiff", "LazyArrays", "LineSearches", "LinearAlgebra", "LinearSolve", "MaybeInplace", "PrecompileTools", "Preferences", "Printf", "RecursiveArrayTools", "Reexport", "SciMLBase", "SimpleNonlinearSolve", "SparseArrays", "SparseDiffTools", "StaticArraysCore", "SymbolicIndexingInterface", "TimerOutputs"] 
        
           git-tree-sha1 = "bcd8812e751326ff1d4b2dd50764b93df51f143b"

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           [[deps.Octavian]] 
        
           deps = ["CPUSummary", "IfElse", "LoopVectorization", "ManualMemory", "PolyesterWeave", "PrecompileTools", "Static", "StaticArrayInterface", "ThreadingUtilities", "VectorizationBase"] 
        
           git-tree-sha1 = "92410e147bdcaf9e2f982a7cc9b1341fc5dd1a77" 
        
           uuid = "6fd5a793-0b7e-452c-907f-f8bfe9c57db4" 
        
           version = "0.3.28" 
        
               [deps.Octavian.extensions] 
        
               ForwardDiffExt = "ForwardDiff" 
        
               HyperDualNumbersExt = "HyperDualNumbers" 
        
               [deps.Octavian.weakdeps] 
        
               ForwardDiff = "f6369f11-7733-5829-9624-2563aa707210" 
        
               HyperDualNumbers = "50ceba7f-c3ee-5a84-a6e8-3ad40456ec97"

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           deps = ["ADTypes", "ArrayInterface", "ConsoleProgressMonitor", "DocStringExtensions", "LBFGSB", "LinearAlgebra", "Logging", "LoggingExtras", "OptimizationBase", "Pkg", "Printf", "ProgressLogging", "Reexport", "SciMLBase", "SparseArrays", "TerminalLoggers"] 
        
           git-tree-sha1 = "81abd38353faaf0297a964fa6115a54c6a066cab"

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           version = "3.26.3" 
        
           [[deps.OptimizationBase]] 
        
           deps = ["ADTypes", "ArrayInterface", "DocStringExtensions", "LinearAlgebra", "Reexport", "Requires", "SciMLBase", "SparseArrays"] 
        
           git-tree-sha1 = "dcb1f85b0da580e2363c0197b0366406031a69cd" 
        
           uuid = "bca83a33-5cc9-4baa-983d-23429ab6bcbb" 
        
           version = "1.2.0"

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git-tree-sha1 = "83b7f5218c6ff83f65fff32923630fe8be9f5131"

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version = "0.2.2"

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git-tree-sha1 = "43870d726f883a47d158beebb1fc3c9fab1da9d6"

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version = "0.3.2"

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           deps = ["ADTypes", "Adapt", "ArrayInterface", "DataStructures", "DiffEqBase", "DocStringExtensions", "EnumX", "ExponentialUtilities", "FastBroadcast", "FastClosures", "FillArrays", "FiniteDiff", "ForwardDiff", "FunctionWrappersWrappers", "IfElse", "InteractiveUtils", "LineSearches", "LinearAlgebra", "LinearSolve", "Logging", "MacroTools", "MuladdMacro", "NonlinearSolve", "Polyester", "PreallocationTools", "PrecompileTools", "Preferences", "RecursiveArrayTools", "Reexport", "SciMLBase", "SciMLOperators", "SciMLStructures", "SimpleNonlinearSolve", "SimpleUnPack", "SparseArrays", "SparseDiffTools", "Static", "StaticArrayInterface", "StaticArrays", "TruncatedStacktraces"] 
        
           git-tree-sha1 = "a8b2d333cd90562b58b977b4033739360b37fb1f"

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version = "6.87.0"

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git-tree-sha1 = "336b7fb8f3c767a934378b7edb2ca8687bee1515"

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version = "0.9.5"

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[[deps.Pathfinder]]

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           deps = ["Distributions", "Folds", "ForwardDiff", "IrrationalConstants", "LinearAlgebra", "LogDensityProblems", "Optim", "Optimization", "OptimizationOptimJL", "PDMats", "PSIS", "ProgressLogging", "Random", "Requires", "SciMLBase", "Statistics", "StatsBase", "Transducers", "UnPack"] 
        
           git-tree-sha1 = "3c3cf5686422e6255351fe9c20520d9f1001fadb"

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           version = "0.8.8" 
        
           weakdeps = ["Accessors", "DynamicHMC", "DynamicPPL", "MCMCChains", "Turing"] 
        
               [deps.Pathfinder.extensions] 
        
               PathfinderDynamicHMCExt = "DynamicHMC" 
        
               PathfinderTuringExt = ["Accessors", "DynamicPPL", "MCMCChains", "Turing"]

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           deps = ["Adapt", "ArrayInterface", "DocStringExtensions", "GPUArraysCore", "IteratorInterfaceExtensions", "LinearAlgebra", "RecipesBase", "StaticArraysCore", "Statistics", "SymbolicIndexingInterface", "Tables"] 
        
           git-tree-sha1 = "b034171b93aebc81b3e1890a036d13a9c4a9e3e0"

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version = "3.27.0"

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           RecursiveArrayToolsReverseDiffExt = ["ReverseDiff", "Zygote"] 
        
           RecursiveArrayToolsSparseArraysExt = ["SparseArrays"]

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           ReverseDiff = "37e2e3b7-166d-5795-8a7a-e32c996b4267" 
        
           SparseArrays = "2f01184e-e22b-5df5-ae63-d93ebab69eaf"

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           deps = ["ADTypes", "Accessors", "ArrayInterface", "CommonSolve", "ConstructionBase", "Distributed", "DocStringExtensions", "EnumX", "Expronicon", "FunctionWrappersWrappers", "IteratorInterfaceExtensions", "LinearAlgebra", "Logging", "Markdown", "PrecompileTools", "Preferences", "Printf", "RecipesBase", "RecursiveArrayTools", "Reexport", "RuntimeGeneratedFunctions", "SciMLOperators", "SciMLStructures", "StaticArraysCore", "Statistics", "SymbolicIndexingInterface", "Tables"] 
        
           git-tree-sha1 = "7f0e208db50f5fee2386b6d8dc9608d580059331"

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version = "2.48.1"

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           deps = ["ADTypes", "Adapt", "ArrayInterface", "ChainRulesCore", "DiffEqBase", "DiffEqCallbacks", "DiffEqNoiseProcess", "Distributions", "EllipsisNotation", "Enzyme", "FiniteDiff", "ForwardDiff", "FunctionProperties", "FunctionWrappersWrappers", "Functors", "GPUArraysCore", "LinearAlgebra", "LinearSolve", "Markdown", "OrdinaryDiffEq", "Parameters", "PreallocationTools", "QuadGK", "Random", "RandomNumbers", "RecursiveArrayTools", "Reexport", "ReverseDiff", "SciMLBase", "SciMLOperators", "SciMLStructures", "SparseDiffTools", "StaticArrays", "StaticArraysCore", "Statistics", "StochasticDiffEq", "SymbolicIndexingInterface", "Tracker", "TruncatedStacktraces", "Zygote"] 
        
           git-tree-sha1 = "0b677567d07f4447f79f6e12a01db5c4dc02e54f"

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           version = "7.64.0" 
        
           [[deps.SciMLStructures]] 
        
           deps = ["ArrayInterface"] 
        
           git-tree-sha1 = "20ad3e7c137156c50c93c888d0f2bc5b7883c729" 
        
           uuid = "53ae85a6-f571-4167-b2af-e1d143709226" 
        
           version = "1.4.2"

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           deps = ["ADTypes", "ArrayInterface", "ConcreteStructs", "DiffEqBase", "DiffResults", "DifferentiationInterface", "FastClosures", "FiniteDiff", "ForwardDiff", "LinearAlgebra", "MaybeInplace", "PrecompileTools", "Reexport", "SciMLBase", "Setfield", "StaticArraysCore"] 
        
           git-tree-sha1 = "4d7a7c177bcb4c6dc465f09db91bfdb28c578919"

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           version = "1.12.0" 
        
           weakdeps = ["ChainRulesCore", "ReverseDiff", "Tracker", "Zygote"]

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           SimpleNonlinearSolveChainRulesCoreExt = "ChainRulesCore" 
        
           SimpleNonlinearSolveReverseDiffExt = "ReverseDiff" 
        
           SimpleNonlinearSolveTrackerExt = "Tracker" 
        
           SimpleNonlinearSolveZygoteExt = "Zygote"

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git-tree-sha1 = "c9e5d7ee75cf6a1ca3a22c9a6a4ef451792cf62b"

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version = "2.20.0"

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           [[deps.SparseMatrixColorings]] 
        
           deps = ["ADTypes", "Compat", "DocStringExtensions", "LinearAlgebra", "Random", "SparseArrays"] 
        
           git-tree-sha1 = "ad048e784b816e4de5553a13f1daf148412f3dbd" 
        
           uuid = "0a514795-09f3-496d-8182-132a7b665d35" 
        
           version = "0.3.6"

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           deps = ["CommonWorldInvalidations", "IfElse", "PrecompileTools"] 
        
           git-tree-sha1 = "87d51a3ee9a4b0d2fe054bdd3fc2436258db2603"

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version = "1.1.1"

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           deps = ["ConcreteStructs", "DiffEqBase", "DiffEqCallbacks", "LinearAlgebra", "Reexport", "SciMLBase"] 
        
           git-tree-sha1 = "ea7119de1cdd294c9b0d8e8ce6a120711c7904c8"

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version = "2.3.0"

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           deps = ["Adapt", "ArrayInterface", "DataStructures", "DiffEqBase", "DiffEqNoiseProcess", "DocStringExtensions", "FiniteDiff", "ForwardDiff", "JumpProcesses", "LevyArea", "LinearAlgebra", "Logging", "MuladdMacro", "NLsolve", "OrdinaryDiffEq", "Random", "RandomNumbers", "RecursiveArrayTools", "Reexport", "SciMLBase", "SciMLOperators", "SparseArrays", "SparseDiffTools", "StaticArrays", "UnPack"] 
        
           git-tree-sha1 = "b47f8ccc5bd06d5f7a643bf6671365ab9d6595d9"

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version = "6.67.0"

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           deps = ["Accessors", "ArrayInterface", "RuntimeGeneratedFunctions", "StaticArraysCore"] 
        
           git-tree-sha1 = "c9fce29fb41a10677e24f74421ebe31220b81ad0"

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version = "0.3.28"

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           deps = ["ADTypes", "AbstractMCMC", "Accessors", "AdvancedHMC", "AdvancedMH", "AdvancedPS", "AdvancedVI", "BangBang", "Bijectors", "DataStructures", "Distributions", "DistributionsAD", "DocStringExtensions", "DynamicPPL", "EllipticalSliceSampling", "ForwardDiff", "Libtask", "LinearAlgebra", "LogDensityProblems", "LogDensityProblemsAD", "MCMCChains", "NamedArrays", "OrderedCollections", "Printf", "Random", "Reexport", "Requires", "SciMLBase", "SpecialFunctions", "Statistics", "StatsAPI", "StatsBase", "StatsFuns"] 
        
           git-tree-sha1 = "8b19dc437b1af6da764aa09c14db571f93fe7a30"

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version = "0.32.3"

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           [[deps.UnrolledUtilities]] 
        
           git-tree-sha1 = "b73f7a7c25a2618c5052c80ed32b07e471cc6cb0" 
        
           uuid = "0fe1646c-419e-43be-ac14-22321958931b" 
        
           version = "0.1.2"

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git-tree-sha1 = "4073c836c2befcb041e5fe306cb6abf621eb3140"

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version = "0.2.0"

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           deps = ["ArgCheck", "ChainRulesCore", "ConcreteStructs", "GPUArraysCore", "LinearAlgebra", "Random", "SpecialFunctions", "Statistics"] 
        
           git-tree-sha1 = "33ce5777ca44b33f708ccbc67ea51b68a68b7bdd"

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version = "1.0.1"

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           WeightInitializersAMDGPUExt = ["AMDGPU", "GPUArrays"] 
        
           WeightInitializersCUDAExt = ["CUDA", "GPUArrays"] 
        
           WeightInitializersGPUArraysExt = "GPUArrays" 
        
           WeightInitializersMetalExt = ["Metal", "GPUArrays"] 
        
           WeightInitializersoneAPIExt = ["oneAPI", "GPUArrays"]

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AMDGPU = "21141c5a-9bdb-4563-92ae-f87d6854732e"

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           GPUArrays = "0c68f7d7-f131-5f86-a1c3-88cf8149b2d7" 
        
           Metal = "dde4c033-4e86-420c-a63e-0dd931031962" 
        
           oneAPI = "8f75cd03-7ff8-4ecb-9b8f-daf728133b1b"

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Member Author

penelopeysm commented Aug 13, 2024

Lovely.

Maybe instead of review comments we should make it open a PR and drop a comment.

penelopeysm added 2 commits

August 13, 2024 10:57


          Make PR instead of review suggestions

4d787fa


          Fix base

ffe75f1

See https://github.com/peter-evans/create-pull-request/blob/main/docs/concepts-guidelines.md#events-which-checkout-a-commit

penelopeysm force-pushed the pysm/test-gha-suggestions branch from 3ec020e to ffe75f1 Compare

August 13, 2024 10:07


          Fix perms

39271eb

penelopeysm force-pushed the pysm/test-gha-suggestions branch from 9d1e5bb to 495b7d6 Compare

August 13, 2024 12:58

Contributor

github-actions bot commented Aug 13, 2024

Hello! The versions of Turing.jl in your Project.toml, _quarto.yml, and/or Manifest.toml did not match the latest release version found on GitHub.

I've made a PR to update these files to match the latest release: #502

Please review the changes and merge the PR if they look good.


          Comment on PR as well

92a7da1

penelopeysm force-pushed the pysm/test-gha-suggestions branch from 495b7d6 to 92a7da1 Compare

August 13, 2024 13:01

Contributor

github-actions bot commented Aug 13, 2024

Hello! The versions of Turing.jl in your Project.toml, _quarto.yml, and/or Manifest.toml did not match the latest release version found on GitHub (https://github.com/TuringLang/Turing.jl/releases/latest).

I've made a PR to update these files to match the latest release: #503

Please review the changes and merge the PR if they look good.


          More useful branch name

43de764

Contributor

github-actions bot commented Aug 13, 2024

Hello! The versions of Turing.jl in your Project.toml, _quarto.yml, and/or Manifest.toml did not match the latest release version found on GitHub (https://github.com/TuringLang/Turing.jl/releases/latest).

I've made a PR to update these files to match the latest release: #505

Please review the changes and merge the PR if they look good.

Member Author

penelopeysm commented Aug 13, 2024

Brilliant, all working very well...

penelopeysm closed this

github-actions bot added a commit that referenced this pull request


          Remove preview for merged PR #500

6fd9caf

yebai deleted the pysm/test-gha-suggestions branch

August 13, 2024 21:10

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