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@UPSCb

Umeå Plant Science Centre Bioinformatics Facility

The UPSC bioinformatics facility

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  1. UPSCb-common UPSCb-common Public

    Common scripts

    HTML 14 12

  2. UPSCb UPSCb Public

    HTML 5 3

  3. Dockerfile Dockerfile Public

    Host the dockerfile from dockerhub/delhomme

    Python 2 2

  4. RnaSeqTutorial RnaSeqTutorial Public

    An R tutorial package that describes the pre-processing of RNA-Seq data - from the raw (FASTQ) data to the alignment (mapping) to a reference genome - and its subsequent differential expression ana…

    R 1 1

  5. NorWood NorWood Public

    NorWood scripts including; preprocessing scripts (R markdown, Python) and Web scripts (HTML, PHP, Python, Javascript)

    HTML

  6. MultiQC MultiQC Public

    Forked from MultiQC/MultiQC

    Aggregate results from bioinformatics analyses across many samples into a single report.

    Python

Repositories

Showing 10 of 13 repositories
  • Tutorial_01_data_science_intro Public
    UPSCb/Tutorial_01_data_science_intro’s past year of commit activity
    R 0 0 0 0 Updated Dec 3, 2024
  • course-web Public

    Template for the workshop website

    UPSCb/course-web’s past year of commit activity
    Pug 0 GPL-3.0 0 0 0 Updated Dec 3, 2024
  • UPSCb-common Public

    Common scripts

    UPSCb/UPSCb-common’s past year of commit activity
    HTML 14 GPL-3.0 12 0 0 Updated Dec 3, 2024
  • Tutorial_02_exploratory_data_analysis Public
    UPSCb/Tutorial_02_exploratory_data_analysis’s past year of commit activity
    0 0 0 0 Updated Dec 3, 2024
  • UPSCb Public
    UPSCb/UPSCb’s past year of commit activity
    HTML 5 MIT 3 0 0 Updated Oct 28, 2024
  • Dockerfile Public

    Host the dockerfile from dockerhub/delhomme

    UPSCb/Dockerfile’s past year of commit activity
    Python 2 2 0 0 Updated Oct 21, 2023
  • SeidRFile Public

    An R package to manipulate sei∂r files

    UPSCb/SeidRFile’s past year of commit activity
    C++ 0 0 0 0 Updated Aug 8, 2023
  • aba Public

    Photoperiodic control of seasonal growth is mediated by ABA acting on cell-cell communication

    UPSCb/aba’s past year of commit activity
    HTML 0 GPL-3.0 0 0 0 Updated Nov 8, 2021
  • spruce-seasonal-needles Public

    Overwintering the boreal winter: From thylakoid ultra structure to photosynthetic adaptations of conifers

    UPSCb/spruce-seasonal-needles’s past year of commit activity
    HTML 0 GPL-3.0 0 0 0 Updated Jun 14, 2021
  • RnaSeqTutorial Public

    An R tutorial package that describes the pre-processing of RNA-Seq data - from the raw (FASTQ) data to the alignment (mapping) to a reference genome - and its subsequent differential expression analysis at the gene and transcript level.

    UPSCb/RnaSeqTutorial’s past year of commit activity
    R 1 1 0 0 Updated Nov 20, 2020
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