test: depot path mount

WilhelmusLab · Jul 29, 2024 · ca33a13 · ca33a13
1 parent e4a5efc
commit ca33a13
Showing 1 changed file with 2 additions and 3 deletions.
diff --git a/ebseg/Dockerfile b/ebseg/Dockerfile
@@ -4,7 +4,7 @@ ENV TERM=xterm
 ENV JULIA_PROJECT=/opt/ice-floe-tracker-pipeline
 ENV JULIA_DEPOT_PATH=/opt/julia
 ENV JULIA_PKGDIR=/opt/julia
-ENV JULIA_BUILD_PYCALL='ENV["PYTHON"]=""; using Pkg; Pkg.build()'
+ENV JULIA_BUILD_PYCALL='ENV["PYTHON"]=""; using Pkg; Pkg.build(); Pkg.instantiate()'
 ENV EBSEG_REPO='https://github.com/WilhelmusLab/ebseg.git'
 ENV IFTPIPELINE_REPO='https://github.com/WilhelmusLab/ice-floe-tracker-pipeline.git'
 ENV LOCAL_PATH_TO_IFT_CLI='/usr/local/bin/ice-floe-tracker.jl'
@@ -47,11 +47,10 @@ WORKDIR /opt
 #===========================================
 RUN git clone --single-branch --branch main --depth 1 ${IFTPIPELINE_REPO}
 RUN julia --project=${JULIA_PROJECT} -e ${JULIA_BUILD_PYCALL}
-RUN julia -e 'using Pkg; Pkg.instantiate()'
 
 # Final setup
 #===========================================
 COPY ../workflow/scripts/ice-floe-tracker.jl ${LOCAL_PATH_TO_IFT_CLI}
 RUN chmod a+x ${LOCAL_PATH_TO_IFT_CLI}
-ENV JULIA_DEPOT_PATH="/home/.julia:$JULIA_DEPOT_PATH"
+ENV JULIA_DEPOT_PATH="/usr/local/bin/julia:$JULIA_DEPOT_PATH"
 CMD ["/bin/bash"]