Dockerized MENTHU

created by Ryo NIWA

How to use menthu_docker

docker pull geedrn/menthu:latest
docker run --rm -dp 3838:3838 geedrn/menthu:latest

After exectution, go to http://localhost:3838

For people who want to make your own image

# download menthu_set.zip and open it
cd menthu_set
docker build . -t IMAGE_NAME

Reference

Docker file was modified from the original repository of MENTHU. https://github.com/Dobbs-Lab/MENTHU

MENTHU_set

menthu_set.zip includes the components of rocker/shiny and original MENTHU scripts. Users can simply download the zip file, defrost it and then docker build in the directory to make a new image. Some features from rocker/shiny was adjusted to have localhost correctly and debug the error mainly from rentrez package on CRAN.

https://github.com/rocker-org/shiny