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  1. BactSeq BactSeq Public

    A nextflow pipeline for performing bacterial RNA-Seq data analysis.

    Nextflow 8 1

  2. perm-predict perm-predict Public

    A web app for machine learning-based prediction of chemical accumulation in bacteria.

    Python

  3. RNA-virus-taxonomy RNA-virus-taxonomy Public

    Methods for the analysis of RNA virus taxonomy.

    Jupyter Notebook

  4. adamd3.github.io adamd3.github.io Public

    Repository for my personal site

    Astro

  5. Floto-Lab/BactGraph Floto-Lab/BactGraph Public

    A graph neural network for studying bacterial gene regulation

    Python

  6. StrainQuant StrainQuant Public

    A Nextflow pipeline for performing bacterial RNA-Seq analysis without a reference genome.

    Nextflow 1