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  1. singlecell_pnm singlecell_pnm Public

    Forked from YeoLab/singlecell_pnm

    ✨ Code and figures accompanying the paper, "Single-cell alternative splicing analysis with Expedition reveals splicing dynamics during neuron differentiation" by Song and Botvinnik, et al

    Jupyter Notebook 1 1

  2. SingleSplice SingleSplice Public

    Forked from jw156605/SingleSplice

    Algorithm for detecting alternative splicing in a population of single cells. See details in Welch et al., Nucleic Acids Research 2016: http://nar.oxfordjournals.org/content/early/2016/01/05/nar.gk…

    C++ 1

  3. brie brie Public

    Forked from huangyh09/brie

    BRIE: Bayesian Regression for Isoform Estimate

    Python 1

  4. Brown-White-FBA Brown-White-FBA Public

    Forked from ramirez-a/Brown-White-FBA

    Generate flux predictions of brown and white adipocytes as performed in Ramirez et al., 2017

    R 1

  5. pread-brown-white pread-brown-white Public

    Forked from jdreyf/pread-brown-white

    Code/output from paired analysis of brown vs. white human preadipocytes from Ramirez et al.

    R 1

  6. sybilxf sybilxf Public

    Forked from jdreyf/sybilxf

    R package for integration of Seahorse extracellular flux (XF) data with metabolic modeling utilizing the R modeling package sybil.

    R 1