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added all three configurations to outlinks ipynb (#3202)
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ANVIL_PORTAL_NAME = "anvil-portal" | ||
ANVIL_CATALOG_NAME = "anvil-catalog" | ||
ANVIL_EXPLORER_NAME = "anvil-explorer" | ||
|
||
PROPERTY_ID_MAP = { | ||
ANVIL_CATALOG_NAME: "368661710", | ||
ANVIL_EXPLORER_NAME: "383267328", | ||
ANVIL_PORTAL_NAME: "368678391", | ||
} | ||
|
||
SECRET_NAME = 'GA4_CREDENTIALS' | ||
GA_PROPERTY_PORTAL = "368678391" # AnVIL Portal - GA4 | ||
PRE_AUDIENCE_EXCLUDE_PAGES_FILTER = "landingPagePlusQueryString!=/guides/content/creating-links" | ||
EXCLUDE_PAGES_FILTER = {"filter": {"fieldName": "audienceId", "numericFilter": {"operation": "EQUAL", "value": {"doubleValue": 5559548544}}}} | ||
ANALYTICS_START = "2021-01-01" | ||
TODAY = 'today' | ||
THIRTY_DAYS_AGO = '30daysAgo' | ||
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||
OAUTH_PORT = 8082 |
287 changes: 287 additions & 0 deletions
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analytics/anvil-analytics-combined/portal-outlinks.ipynb
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{ | ||
"cells": [ | ||
{ | ||
"cell_type": "code", | ||
"execution_count": 1, | ||
"metadata": {}, | ||
"outputs": [ | ||
{ | ||
"name": "stdout", | ||
"output_type": "stream", | ||
"text": [ | ||
"env: GA4_CREDENTIALS=../../../analytics_keys/ga4_key_test.json\n" | ||
] | ||
} | ||
], | ||
"source": [ | ||
"# Add credentials environment variable here\n", | ||
"# Example:\n", | ||
"#%env GA4_CREDENTIALS=your/path/to/your/credentials.json\n", | ||
"%env GA4_CREDENTIALS=../../../analytics_keys/ga4_key_test.json" | ||
] | ||
}, | ||
{ | ||
"cell_type": "code", | ||
"execution_count": 2, | ||
"metadata": {}, | ||
"outputs": [], | ||
"source": [ | ||
"import analytics.charts as ac\n", | ||
"import analytics.api as ga\n", | ||
"import pandas as pd\n", | ||
"from constants import *\n" | ||
] | ||
}, | ||
{ | ||
"cell_type": "code", | ||
"execution_count": 3, | ||
"metadata": {}, | ||
"outputs": [ | ||
{ | ||
"name": "stdout", | ||
"output_type": "stream", | ||
"text": [ | ||
"Please visit this URL to authorize this application: https://accounts.google.com/o/oauth2/auth?response_type=code&client_id=425030666072-vun85q7nt3038skng8gs0f03juh97e17.apps.googleusercontent.com&redirect_uri=http%3A%2F%2Flocalhost%3A8082%2F&scope=https%3A%2F%2Fwww.googleapis.com%2Fauth%2Fanalytics.readonly&state=9yQGXQsk0VZyaaqUuCVtkfw6Yjsi9T&access_type=offline\n" | ||
] | ||
} | ||
], | ||
"source": [ | ||
"default_params = {\n", | ||
" \"service_system\": ac.authenticate_ga(SECRET_NAME, ga.ga4_service_params, port=OAUTH_PORT),\n", | ||
"}\n", | ||
"outlink_search_params = {\n", | ||
" \"start_date\": '30daysAgo',\n", | ||
" \"end_date\": TODAY,\n", | ||
" \"dimensionFilter\": {\n", | ||
" \"filter\": {\n", | ||
" \"stringFilter\": {\n", | ||
" \"matchType\": \"EXACT\",\n", | ||
" \"value\": \"true\"\n", | ||
" },\n", | ||
" \"fieldName\": \"outbound\"\n", | ||
" }\n", | ||
" }\n", | ||
"}\n", | ||
"catalog_params = {\n", | ||
" **default_params,\n", | ||
" **outlink_search_params,\n", | ||
" \"property\": PROPERTY_ID_MAP[ANVIL_CATALOG_NAME],\n", | ||
"}\n", | ||
"explorer_params = {\n", | ||
" **default_params,\n", | ||
" **outlink_search_params,\n", | ||
" \"property\": PROPERTY_ID_MAP[ANVIL_EXPLORER_NAME],\n", | ||
"}\n", | ||
"portal_params = {\n", | ||
" **default_params,\n", | ||
" **outlink_search_params,\n", | ||
" \"base_dimension_filter\": EXCLUDE_PAGES_FILTER,\n", | ||
" \"property\": PROPERTY_ID_MAP[ANVIL_PORTAL_NAME],\n", | ||
"}\n", | ||
"\n", | ||
"outlink_params_for_each_property = {\n", | ||
" ANVIL_PORTAL_NAME: portal_params,\n", | ||
" ANVIL_CATALOG_NAME: catalog_params,\n", | ||
" ANVIL_EXPLORER_NAME: explorer_params,\n", | ||
"}" | ||
] | ||
}, | ||
{ | ||
"cell_type": "code", | ||
"execution_count": 20, | ||
"metadata": {}, | ||
"outputs": [ | ||
{ | ||
"name": "stdout", | ||
"output_type": "stream", | ||
"text": [ | ||
"anvil-portal\n", | ||
"anvil-catalog\n", | ||
"anvil-explorer\n" | ||
] | ||
} | ||
], | ||
"source": [ | ||
"results_dict = {}\n", | ||
"\n", | ||
"for key in outlink_params_for_each_property:\n", | ||
" print(key)\n", | ||
" df_outlinks = (ac.get_data_df(\n", | ||
" [\"eventCount\"],\n", | ||
" [\"pagePath\", \"linkDomain\", \"linkUrl\"], \n", | ||
" **outlink_params_for_each_property[key], \n", | ||
" df_processor=lambda df: df.loc[df.index.get_level_values(1) != \"\"]\n", | ||
" )).rename_axis(\n", | ||
" index={\"pagePath\": \"Current Page\", \"linkDomain\": \"Outlink Domain\", \"linkUrl\": \"Outlink URL\"}\n", | ||
" )\n", | ||
" results_dict[key] = df_outlinks\n", | ||
"\n", | ||
"with pd.ExcelWriter(\"outlinks_summary.xlsx\") as writer:\n", | ||
" for key in results_dict:\n", | ||
" results_dict[key].to_excel(writer, sheet_name=key)" | ||
] | ||
}, | ||
{ | ||
"cell_type": "code", | ||
"execution_count": 21, | ||
"metadata": {}, | ||
"outputs": [ | ||
{ | ||
"data": { | ||
"text/html": [ | ||
"<div>\n", | ||
"<style scoped>\n", | ||
" .dataframe tbody tr th:only-of-type {\n", | ||
" vertical-align: middle;\n", | ||
" }\n", | ||
"\n", | ||
" .dataframe tbody tr th {\n", | ||
" vertical-align: top;\n", | ||
" }\n", | ||
"\n", | ||
" .dataframe thead th {\n", | ||
" text-align: right;\n", | ||
" }\n", | ||
"</style>\n", | ||
"<table border=\"1\" class=\"dataframe\">\n", | ||
" <thead>\n", | ||
" <tr style=\"text-align: right;\">\n", | ||
" <th></th>\n", | ||
" <th></th>\n", | ||
" <th></th>\n", | ||
" <th>eventCount</th>\n", | ||
" </tr>\n", | ||
" <tr>\n", | ||
" <th>Current Page</th>\n", | ||
" <th>Outlink Domain</th>\n", | ||
" <th>Outlink URL</th>\n", | ||
" <th></th>\n", | ||
" </tr>\n", | ||
" </thead>\n", | ||
" <tbody>\n", | ||
" <tr>\n", | ||
" <th>/data/consortia/GTEx/workspaces</th>\n", | ||
" <th>anvil.terra.bio</th>\n", | ||
" <th>https://anvil.terra.bio/</th>\n", | ||
" <td>26</td>\n", | ||
" </tr>\n", | ||
" <tr>\n", | ||
" <th>/data/consortia/HPRC/workspaces</th>\n", | ||
" <th>anvil.terra.bio</th>\n", | ||
" <th>https://anvil.terra.bio/</th>\n", | ||
" <td>18</td>\n", | ||
" </tr>\n", | ||
" <tr>\n", | ||
" <th>/data/consortia/GREGoR</th>\n", | ||
" <th>gregorconsortium.org</th>\n", | ||
" <th>https://gregorconsortium.org/data</th>\n", | ||
" <td>15</td>\n", | ||
" </tr>\n", | ||
" <tr>\n", | ||
" <th>/data/studies/phs001642/workspaces</th>\n", | ||
" <th>anvil.terra.bio</th>\n", | ||
" <th>https://anvil.terra.bio/</th>\n", | ||
" <td>14</td>\n", | ||
" </tr>\n", | ||
" <tr>\n", | ||
" <th>/data/studies/phs000424/workspaces</th>\n", | ||
" <th>anvil.terra.bio</th>\n", | ||
" <th>https://anvil.terra.bio/</th>\n", | ||
" <td>13</td>\n", | ||
" </tr>\n", | ||
" <tr>\n", | ||
" <th>...</th>\n", | ||
" <th>...</th>\n", | ||
" <th>...</th>\n", | ||
" <td>...</td>\n", | ||
" </tr>\n", | ||
" <tr>\n", | ||
" <th rowspan=\"2\" valign=\"top\">/data/studies/phs002378</th>\n", | ||
" <th rowspan=\"2\" valign=\"top\">ncbi.nlm.nih.gov</th>\n", | ||
" <th>https://www.ncbi.nlm.nih.gov/books/NBK5295/</th>\n", | ||
" <td>1</td>\n", | ||
" </tr>\n", | ||
" <tr>\n", | ||
" <th>https://www.ncbi.nlm.nih.gov/projects/gap/cgi-bin/study.cgi?study_id=phs001026</th>\n", | ||
" <td>1</td>\n", | ||
" </tr>\n", | ||
" <tr>\n", | ||
" <th>/data/studies/phs003047</th>\n", | ||
" <th>dbgap.ncbi.nlm.nih.gov</th>\n", | ||
" <th>https://dbgap.ncbi.nlm.nih.gov/aa/wga.cgi?adddataset=phs003047</th>\n", | ||
" <td>1</td>\n", | ||
" </tr>\n", | ||
" <tr>\n", | ||
" <th>/data/studies/phs003181/workspaces</th>\n", | ||
" <th>anvil.terra.bio</th>\n", | ||
" <th>https://anvil.terra.bio/</th>\n", | ||
" <td>1</td>\n", | ||
" </tr>\n", | ||
" <tr>\n", | ||
" <th>/data/studies/phs003184</th>\n", | ||
" <th>ncbi.nlm.nih.gov</th>\n", | ||
" <th>https://www.ncbi.nlm.nih.gov/projects/gap/cgi-bin/study.cgi?study_id=phs003184.v1.p1</th>\n", | ||
" <td>1</td>\n", | ||
" </tr>\n", | ||
" </tbody>\n", | ||
"</table>\n", | ||
"<p>61 rows × 1 columns</p>\n", | ||
"</div>" | ||
], | ||
"text/plain": [ | ||
" eventCount\n", | ||
"Current Page Outlink Domain Outlink URL \n", | ||
"/data/consortia/GTEx/workspaces anvil.terra.bio https://anvil.terra.bio/ 26\n", | ||
"/data/consortia/HPRC/workspaces anvil.terra.bio https://anvil.terra.bio/ 18\n", | ||
"/data/consortia/GREGoR gregorconsortium.org https://gregorconsortium.org/data 15\n", | ||
"/data/studies/phs001642/workspaces anvil.terra.bio https://anvil.terra.bio/ 14\n", | ||
"/data/studies/phs000424/workspaces anvil.terra.bio https://anvil.terra.bio/ 13\n", | ||
"... ...\n", | ||
"/data/studies/phs002378 ncbi.nlm.nih.gov https://www.ncbi.nlm.nih.gov/books/NBK5295/ 1\n", | ||
" https://www.ncbi.nlm.nih.gov/projects/gap/cgi-b... 1\n", | ||
"/data/studies/phs003047 dbgap.ncbi.nlm.nih.gov https://dbgap.ncbi.nlm.nih.gov/aa/wga.cgi?addda... 1\n", | ||
"/data/studies/phs003181/workspaces anvil.terra.bio https://anvil.terra.bio/ 1\n", | ||
"/data/studies/phs003184 ncbi.nlm.nih.gov https://www.ncbi.nlm.nih.gov/projects/gap/cgi-b... 1\n", | ||
"\n", | ||
"[61 rows x 1 columns]" | ||
] | ||
}, | ||
"execution_count": 21, | ||
"metadata": {}, | ||
"output_type": "execute_result" | ||
} | ||
], | ||
"source": [ | ||
"results_dict[ANVIL_CATALOG_NAME]" | ||
] | ||
}, | ||
{ | ||
"cell_type": "code", | ||
"execution_count": null, | ||
"metadata": {}, | ||
"outputs": [], | ||
"source": [] | ||
} | ||
], | ||
"metadata": { | ||
"kernelspec": { | ||
"display_name": "venv", | ||
"language": "python", | ||
"name": "python3" | ||
}, | ||
"language_info": { | ||
"codemirror_mode": { | ||
"name": "ipython", | ||
"version": 3 | ||
}, | ||
"file_extension": ".py", | ||
"mimetype": "text/x-python", | ||
"name": "python", | ||
"nbconvert_exporter": "python", | ||
"pygments_lexer": "ipython3", | ||
"version": "3.12.4" | ||
} | ||
}, | ||
"nbformat": 4, | ||
"nbformat_minor": 2 | ||
} |
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