FeatHandleInconsistentGrid #410
This file contains bidirectional Unicode text that may be interpreted or compiled differently than what appears below. To review, open the file in an editor that reveals hidden Unicode characters.
Learn more about bidirectional Unicode characters
name: mamba environment testing | |
on: | |
push: | |
branches: [ main ] | |
pull_request: | |
branches: [ main ] | |
jobs: | |
build-linux: | |
runs-on: ubuntu-latest | |
defaults: | |
run: | |
shell: bash -el {0} | |
steps: | |
- uses: actions/checkout@v4 | |
with: | |
submodules: 'true' | |
- name: Set up Miniconda | |
uses: conda-incubator/setup-miniconda@v3 | |
with: | |
activate-environment: AodnCloudOptimised | |
environment-file: environment.yml | |
auto-activate-base: false # Prevent activating base env | |
- name: Install dependencies | |
shell: bash -el {0} | |
run: | | |
conda install --yes mamba | |
mamba env create --name AodnCloudOptimised --file environment.yml || true # Create only if not exists | |
conda activate AodnCloudOptimised | |
mamba env update --name AodnCloudOptimised --file environment.yml | |
- name: Activate Conda environment | |
shell: bash -el {0} | |
run: | | |
conda init | |
conda activate AodnCloudOptimised | |
poetry install --no-interaction | |
- name: Run pytest and coverage | |
run: | | |
coverage run -m pytest | |
coverage report --fail-under=60 | |
coverage xml -o coverage.xml | |
# - name: Upload coverage report | |
#uses: actions/upload-artifact@v2 | |
#with: | |
#name: coverage-report | |
# path: coverage.xml | |
- name: Upload coverage reports to Codecov | |
uses: codecov/[email protected] | |
with: | |
token: ${{ secrets.CODECOV_TOKEN }} | |
path: coverage.xml |