(Feat) mod notebooks to install required packages2 #21
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| name: aodn_cloud_optimised | |
| on: | |
| push: | |
| branches: [ main ] | |
| pull_request: | |
| branches: [ main ] | |
| jobs: | |
| build-linux: | |
| runs-on: ubuntu-latest | |
| steps: | |
| - uses: actions/checkout@v3 | |
| with: | |
| submodules: 'true' | |
| - name: Install Miniconda | |
| uses: conda-incubator/setup-miniconda@v2 | |
| with: | |
| installer-url: https://repo.anaconda.com/miniconda/Miniconda3-py38_4.11.0-Linux-x86_64.sh | |
| auto-update-conda: false # Disable auto-update to use mamba | |
| activate-environment: AodbCloudOptimised | |
| - name: Install mamba | |
| run: | | |
| conda install -n base -c conda-forge mamba | |
| - name: Create Conda environment with mamba | |
| run: | | |
| mamba env update -n AodbCloudOptimised -f environment.yml | |
| - name: Activate Conda environment | |
| run: | | |
| conda activate AodbCloudOptimised | |
| - name: Run unittests for AODN CLOUD OPTIMISED module | |
| run: | | |
| pytest . | |