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State of the CARD 2021 Presentations & Demonstrations, view recorded lectures, overview, and walkthroughs.

Shell 10 4 Updated Feb 17, 2021

Frequently asked questions for CARD, RGI, and ARO

3 Updated Aug 5, 2024

Identifying changes in resistome relative to closest relatives and contextualising results

Python 2 Updated Mar 9, 2021

A dummer, smaller version of GROOT

JavaScript 9 Updated Nov 18, 2019

A resistome profiler for Graphing Resistance Out Of meTagenomes

Go 65 6 Updated May 11, 2020

Resistance Gene Identifier (RGI). Software to predict resistomes from protein or nucleotide data, including metagenomics data, based on homology and SNP models.

Python 355 80 Updated Feb 26, 2025

High-throughput assessment of standardised AMR primers using VAware

Jupyter Notebook 3 1 Updated Apr 8, 2019

A resistome profiler for Graphing Resistance Out Of meTagenomes

Go 2 Updated Oct 16, 2018

IRIDA Plugin for AMR Detection

Java 3 3 Updated Mar 9, 2023

MOB-suite: Software tools for clustering, reconstruction and typing of plasmids from draft assemblies

Python 140 32 Updated Oct 9, 2024

Statistical analyses for outputs of the AMR++ analytic pipeline

R 2 Updated May 21, 2019

AMRFinderPlus - Identify AMR genes and point mutations, and virulence and stress resistance genes in assembled bacterial nucleotide and protein sequence.

C++ 298 44 Updated Feb 21, 2025

Tool to predict the presence of antimicrobial resistance in clinical metagenomes

Python 8 2 Updated May 19, 2023

A toolkit to validate and consolidate antimicrobial resistance gene databases

Python 19 1 Updated Apr 21, 2023

🔎 💊 Mass screening of contigs for antimicrobial and virulence genes

Perl 394 95 Updated Dec 31, 2023

Metadata and website for the Open Bio Ontologies Foundry Ontology Registry

Python 172 207 Updated Mar 18, 2025