Merge pull request #4 from Aratz/DEVELOP-2613_remove_queue_system

Fix small bug in `local_runner_service`
arteria-project · Aug 14, 2023 · b2e8cd8 · b2e8cd8
2 parents c4f6922 + 3bf137e
commit b2e8cd8
Showing 1 changed file with 1 addition and 1 deletion.
diff --git a/sequencing_report_service/services/local_runner_service.py b/sequencing_report_service/services/local_runner_service.py
@@ -56,7 +56,7 @@ async def _start_process(self, job_id):
             env = {**sys_env, **job_env}
 
             working_dir = os.path.join(
-                self._nextflow_log_dirs, job_id)
+                self._nextflow_log_dirs, str(job_id))
             os.mkdir(working_dir)
             nxf_log = os.path.join(working_dir, "nextflow.out")
             nxf_log_fh = open(nxf_log, "w", encoding="utf-8")