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Merge pull request #5 from soniossos/sferkel
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Exercise 1
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asntech authored Dec 6, 2024
2 parents dc0f283 + b7278c2 commit 90f9bef
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19 changes: 19 additions & 0 deletions 04-containers/solutions/sferkel/exercise1/Dockerfile
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FROM python:3.9-slim

## Install click 7.1.2 uisng pip from PyPI
RUN pip install click==7.1.2

## set working directory to /opt
WORKDIR /opt

## Copy the app.py file to /opt
COPY app.py /opt

## Make app.py executeable
RUN chmod +x /opt/app.py

## Add app.py to the path
RUN export PATH=/opt:$PATH

## Run the application
CMD ["python", "/opt/app.py", "--name", "Sonia"]
17 changes: 17 additions & 0 deletions 04-containers/solutions/sferkel/exercise1/app.py
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import click

@click.command()
@click.option('--name', default='Test', help='Name of the participant.')
@click.version_option(version='1.1.0')
def main(name):
"""
A demo App for BIOS259: The Art of Reproducible Science
https://github.com/asntech/bios259-a24
Author: Aziz Khan <[email protected]>
"""

print(f"Hello, {name}!\nWelcome to BIOS259 – The Art of Reproducible Science")

if __name__ == "__main__":
main()
19 changes: 19 additions & 0 deletions 04-containers/solutions/sferkel/exercise2/Dockerfile
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FROM asntech/bios259:a24.e1

## Install latest version of seaborn uisng pip from PyPI - https://pypi.org/project/seaborn/
RUN pip install seaborn

## set working directory to /opt
WORKDIR /opt

## Copy the app2.py file to /opt
COPY app2.py /opt

## Make app2.py executeable
RUN chmod +x /opt/app2.py

## Add ap2p.py to the path
ENV PATH=/opt:$PATH

## Run the application help
CMD ["app2.py", "--help"]
29 changes: 29 additions & 0 deletions 04-containers/solutions/sferkel/exercise2/app2.py
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#!/usr/bin/env python

import click
import seaborn as sns

@click.command()
@click.option('--dataset', default='healthexp', help='Name of the dataset – github.com/mwaskom/seaborn-data')
@click.version_option(version='1.2.0')
def main(dataset):
"""
A demo App2 for BIOS259: The Art of Reproducible Science
https://github.com/asntech/bios259-a24
Author: Aziz Khan <[email protected]>
"""
# Load the dataset
try:
dataset = sns.load_dataset(dataset)
except ValueError as e:
click.echo(f"Error: {e}")
return

# Print dataset information
click.echo(f"Descriptive Statistics for {dataset} dataset:")
click.echo("==============================================")
click.echo(dataset.describe())

if __name__ == "__main__":
main()

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