add optional input dir for aimec analysis #2906
Workflow file for this run
This file contains bidirectional Unicode text that may be interpreted or compiled differently than what appears below. To review, open the file in an editor that reveals hidden Unicode characters.
Learn more about bidirectional Unicode characters
# This workflow will install Python dependencies, run tests and lint with a single version of Python | |
# For more information see: https://help.github.com/actions/language-and-framework-guides/using-python-with-github-actions | |
name: Test single python version | |
on: | |
push: | |
branches: [ master ] | |
paths-ignore: | |
- 'docs/**' | |
pull_request: | |
branches: [ master ] | |
paths-ignore: | |
- 'docs/**' | |
workflow_dispatch: | |
jobs: | |
build: | |
runs-on: ubuntu-latest | |
steps: | |
- uses: actions/checkout@v3 | |
with: | |
fetch-depth: 0 | |
- name: Set up Python | |
uses: actions/setup-python@v4 | |
with: | |
python-version: '3.10' | |
check-latest: true | |
- name: Install dependencies | |
run: | | |
python -m pip install --upgrade pip | |
pip install flake8 pytest pytest-cov | |
pip install numpy cython | |
# This compilation is necessary to have the .c file for the next step | |
# Alternative is to include the .c file in the repo | |
- name: Compile cython code | |
run: | | |
python setup.py build_ext --inplace --define CYTHON_TRACE | |
- name: Install avaframe | |
run: | | |
pip install . | |
- name: Lint with flake8 | |
run: | | |
# stop the build if there are Python syntax errors or undefined names | |
flake8 . --count --select=E9,F63,F7,F82 --show-source --statistics | |
# exit-zero treats all errors as warnings. The GitHub editor is 127 chars wide | |
flake8 . --count --exit-zero --max-complexity=10 --max-line-length=127 --statistics | |
- name: Test with pytest | |
run: | | |
pytest -ra --cov --cov-report=xml --cov-config=.coveragerc | |
- name: Test & publish code coverage | |
uses: paambaati/[email protected] | |
env: | |
CC_TEST_REPORTER_ID: ${{ secrets.CODECLIMATE_ID }} | |
- name: Upload coverage to Codecov | |
uses: codecov/codecov-action@v3 | |
with: | |
fail_ci_if_error: false | |
name: codecov-umbrella | |
verbose: true |