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exSTRa v0.90.0

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@trickytank trickytank released this 30 Jun 03:55
· 98 commits to master since this release

This release adds these features:

  • Added known repeat databases for hg38 and GRCh38
  • Known repeat database: name of start and end column more flexible now, so now the column name should end with either 'start' or 'end' (case-insensitive, though only the latest version of the Perl module is also case-insensitive). This means that any future known repeat files do not confusingly have the column names hg19_start and hg19_end when on a different genome build.

Under the hood changes:

  • deleting old unused files and code
  • testing tsum_test reproducibility (for any future optimisations)