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adding easyconfigs: HPL-2.3-foss-2024a.eb, gfbf-2024a.eb, gompi-2024a…
….eb, OSU-Micro-Benchmarks-7.4-gompi-2024a.eb, FFTW.MPI-3.3.10-gompi-2024a.eb, foss-2024a.eb, SciPy-bundle-2024.05-gfbf-2024a.eb, ScaLAPACK-2.2.0-gompi-2024a-fb.eb
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19 changes: 19 additions & 0 deletions
19
easybuild/easyconfigs/f/FFTW.MPI/FFTW.MPI-3.3.10-gompi-2024a.eb
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name = 'FFTW.MPI' | ||
version = '3.3.10' | ||
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homepage = 'https://www.fftw.org' | ||
description = """FFTW is a C subroutine library for computing the discrete Fourier transform (DFT) | ||
in one or more dimensions, of arbitrary input size, and of both real and complex data.""" | ||
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toolchain = {'name': 'gompi', 'version': '2024a'} | ||
toolchainopts = {'pic': True} | ||
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source_urls = [homepage] | ||
sources = ['fftw-%(version)s.tar.gz'] | ||
checksums = ['56c932549852cddcfafdab3820b0200c7742675be92179e59e6215b340e26467'] | ||
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dependencies = [('FFTW', '3.3.10')] | ||
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runtest = 'check' | ||
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moduleclass = 'numlib' |
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easyblock = 'Toolchain' | ||
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name = 'foss' | ||
version = '2024a' | ||
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homepage = 'https://easybuild.readthedocs.io/en/master/Common-toolchains.html#foss-toolchain' | ||
description = """GNU Compiler Collection (GCC) based compiler toolchain, including | ||
OpenMPI for MPI support, OpenBLAS (BLAS and LAPACK support), FFTW and ScaLAPACK.""" | ||
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toolchain = SYSTEM | ||
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local_gccver = '13.3.0' | ||
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# toolchain used to build foss dependencies | ||
local_comp_mpi_tc = ('gompi', version) | ||
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# we need GCC and OpenMPI as explicit dependencies instead of gompi toolchain | ||
# because of toolchain preparation functions | ||
dependencies = [ | ||
('GCC', local_gccver), | ||
('OpenMPI', '5.0.3', '', ('GCC', local_gccver)), | ||
('FlexiBLAS', '3.4.4', '', ('GCC', local_gccver)), | ||
('FFTW', '3.3.10', '', ('GCC', local_gccver)), | ||
('FFTW.MPI', '3.3.10', '', local_comp_mpi_tc), | ||
('ScaLAPACK', '2.2.0', '-fb', local_comp_mpi_tc), | ||
] | ||
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moduleclass = 'toolchain' |
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easyblock = 'Toolchain' | ||
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name = 'gfbf' | ||
version = '2024a' | ||
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homepage = '(none)' | ||
description = """GNU Compiler Collection (GCC) based compiler toolchain, including | ||
FlexiBLAS (BLAS and LAPACK support) and (serial) FFTW.""" | ||
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toolchain = SYSTEM | ||
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local_gccver = '13.3.0' | ||
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dependencies = [ | ||
('GCC', local_gccver), | ||
('FlexiBLAS', '3.4.4', '', ('GCC', local_gccver)), | ||
('FFTW', '3.3.10', '', ('GCC', local_gccver)), | ||
] | ||
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moduleclass = 'toolchain' |
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easyblock = 'Toolchain' | ||
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name = 'gompi' | ||
version = '2024a' | ||
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homepage = '(none)' | ||
description = """GNU Compiler Collection (GCC) based compiler toolchain, | ||
including OpenMPI for MPI support.""" | ||
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toolchain = SYSTEM | ||
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local_gccver = '13.3.0' | ||
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# compiler toolchain dependencies | ||
dependencies = [ | ||
('GCC', local_gccver), # includes both GCC and binutils | ||
('OpenMPI', '5.0.3', '', ('GCC', local_gccver)), | ||
] | ||
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moduleclass = 'toolchain' |
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name = 'HPL' | ||
version = '2.3' | ||
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homepage = 'https://www.netlib.org/benchmark/hpl/' | ||
description = """HPL is a software package that solves a (random) dense linear system in double precision (64 bits) | ||
arithmetic on distributed-memory computers. It can thus be regarded as a portable as well as freely available | ||
implementation of the High Performance Computing Linpack Benchmark.""" | ||
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toolchain = {'name': 'foss', 'version': '2024a'} | ||
toolchainopts = {'usempi': True} | ||
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source_urls = ['https://www.netlib.org/benchmark/%(namelower)s'] | ||
sources = [SOURCELOWER_TAR_GZ] | ||
# fix Make dependencies, so parallel build also works | ||
patches = ['HPL_parallel-make.patch'] | ||
checksums = [ | ||
'32c5c17d22330e6f2337b681aded51637fb6008d3f0eb7c277b163fadd612830', # hpl-2.3.tar.gz | ||
'2a5bf9c4f328049828ddecec7ba3f05a9e25d236f4212747c53bd22fea80c5e6', # HPL_parallel-make.patch | ||
] | ||
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moduleclass = 'tools' |
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26
easybuild/easyconfigs/o/OSU-Micro-Benchmarks/OSU-Micro-Benchmarks-7.4-gompi-2024a.eb
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easyblock = 'ConfigureMake' | ||
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name = 'OSU-Micro-Benchmarks' | ||
version = '7.4' | ||
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homepage = 'https://mvapich.cse.ohio-state.edu/benchmarks/' | ||
description = """OSU Micro-Benchmarks""" | ||
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toolchain = {'name': 'gompi', 'version': '2024a'} | ||
toolchainopts = {'usempi': True} | ||
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source_urls = ['https://mvapich.cse.ohio-state.edu/download/mvapich/'] | ||
sources = [SOURCELOWER_TAR_GZ] | ||
checksums = ['1edd0c2efa61999409bfb28740a7f39689a5b42b1a1b4c66d1656e5637f7cefc'] | ||
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local_benchmark_dirs = [ | ||
'libexec/osu-micro-benchmarks/mpi/%s' % x for x in ['collective', 'one-sided', 'pt2pt', 'startup'] | ||
] | ||
modextrapaths = {'PATH': local_benchmark_dirs} | ||
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sanity_check_paths = { | ||
'files': [], | ||
'dirs': local_benchmark_dirs, | ||
} | ||
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moduleclass = 'perf' |
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40
easybuild/easyconfigs/s/ScaLAPACK/ScaLAPACK-2.2.0-gompi-2024a-fb.eb
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name = 'ScaLAPACK' | ||
version = '2.2.0' | ||
versionsuffix = '-fb' | ||
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homepage = 'https://www.netlib.org/scalapack/' | ||
description = """The ScaLAPACK (or Scalable LAPACK) library includes a subset of LAPACK routines | ||
redesigned for distributed memory MIMD parallel computers.""" | ||
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toolchain = {'name': 'gompi', 'version': '2024a'} | ||
toolchainopts = {'extra_fflags': '-lpthread', 'openmp': True, 'pic': True, 'usempi': True} | ||
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source_urls = [homepage] | ||
sources = [SOURCELOWER_TGZ] | ||
patches = ['ScaLAPACK-%(version)s_fix-GCC-10.patch'] | ||
checksums = [ | ||
'40b9406c20735a9a3009d863318cb8d3e496fb073d201c5463df810e01ab2a57', # scalapack-2.2.0.tgz | ||
'f6bc3c6dee012ba4a696548a2e12b6aae932ce4fd5a142153b338839f52b5906', # ScaLAPACK-2.2.0_fix-GCC-10.patch | ||
] | ||
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builddependencies = [ | ||
('CMake', '3.29.3'), | ||
] | ||
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dependencies = [ | ||
('FlexiBLAS', '3.4.4'), | ||
] | ||
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# Config Opts based on AOCL User Guide: | ||
# https://developer.amd.com/wp-content/resources/AOCL_User%20Guide_2.2.pdf | ||
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configopts = '-DBUILD_SHARED_LIBS=ON ' | ||
configopts += '-DBLAS_LIBRARIES="$EBROOTFLEXIBLAS/lib/libflexiblas.%s" ' % SHLIB_EXT | ||
configopts += '-DLAPACK_LIBRARIES="$EBROOTFLEXIBLAS/lib/libflexiblas.%s" ' % SHLIB_EXT | ||
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sanity_check_paths = { | ||
'files': ['lib/libscalapack.%s' % SHLIB_EXT, 'lib64/libscalapack.%s' % SHLIB_EXT], | ||
'dirs': ["lib", "lib64"], | ||
} | ||
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moduleclass = 'numlib' |
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97
easybuild/easyconfigs/s/SciPy-bundle/SciPy-bundle-2024.05-gfbf-2024a.eb
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easyblock = 'PythonBundle' | ||
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name = 'SciPy-bundle' | ||
version = '2024.05' | ||
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homepage = 'https://python.org/' | ||
description = "Bundle of Python packages for scientific software" | ||
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toolchain = {'name': 'gfbf', 'version': '2024a'} | ||
toolchainopts = {'pic': True, 'lowopt': True} | ||
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builddependencies = [ | ||
('hypothesis', '6.103.1'), | ||
('UnZip', '6.0'), | ||
# scipy >= 1.9.0 uses Meson/Ninja | ||
('Meson', '1.4.0'), | ||
('meson-python', '0.16.0'), | ||
('Ninja', '1.12.1'), | ||
('pkgconf', '2.2.0'), # required by scipy | ||
] | ||
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dependencies = [ | ||
('Python', '3.12.3'), | ||
('Python-bundle-PyPI', '2024.06'), | ||
('pybind11', '2.12.0'), # required by scipy | ||
] | ||
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use_pip = True | ||
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# order is important! | ||
exts_list = [ | ||
('numpy', '1.26.4', { | ||
'patches': ['numpy-1.22.3_disable-broken-override-test.patch'], | ||
'checksums': [ | ||
{'numpy-1.26.4.tar.gz': '2a02aba9ed12e4ac4eb3ea9421c420301a0c6460d9830d74a9df87efa4912010'}, | ||
{'numpy-1.22.3_disable-broken-override-test.patch': | ||
'9c589bb073b28b25ff45eb3c63c57966aa508dd8b318d0b885b6295271e4983c'}, | ||
], | ||
}), | ||
('ply', '3.11', { | ||
'checksums': ['00c7c1aaa88358b9c765b6d3000c6eec0ba42abca5351b095321aef446081da3'], | ||
}), | ||
('gast', '0.5.4', { | ||
'checksums': ['9c270fe5f4b130969b54174de7db4e764b09b4f7f67ccfc32480e29f78348d97'], | ||
}), | ||
('beniget', '0.4.1', { | ||
'checksums': ['75554b3b8ad0553ce2f607627dad3d95c60c441189875b98e097528f8e23ac0c'], | ||
}), | ||
('pythran', '0.16.1', { | ||
'checksums': ['861748c0f9c7d422b32724b114b3817d818ed4eab86c09781aa0a3f7ceabb7f9'], | ||
}), | ||
('versioneer', '0.29', { | ||
'checksums': ['5ab283b9857211d61b53318b7c792cf68e798e765ee17c27ade9f6c924235731'], | ||
}), | ||
('scipy', '1.13.1', { | ||
'enable_slow_tests': True, | ||
'ignore_test_result': False, | ||
'patches': [ | ||
'scipy-1.11.1_disable-tests.patch', | ||
'scipy-1.11.1_xfail-aarch64_test_maxiter_worsening.patch', | ||
], | ||
'checksums': [ | ||
{'scipy-1.13.1.tar.gz': '095a87a0312b08dfd6a6155cbbd310a8c51800fc931b8c0b84003014b874ed3c'}, | ||
{'scipy-1.11.1_disable-tests.patch': '906bfb03397d94882ccdc1b93bc2c8e854e0e060c2d107c83042992394e6a4af'}, | ||
{'scipy-1.11.1_xfail-aarch64_test_maxiter_worsening.patch': | ||
'918c8e6fa8215d459126f267764c961bde729ea4a116c7f6287cddfdc58ffcea'}, | ||
], | ||
}), | ||
('numexpr', '2.10.0', { | ||
'patches': ['numexpr-2.10.0_fix-numpy-1.x.patch'], | ||
'checksums': [ | ||
{'numexpr-2.10.0.tar.gz': 'c89e930752639df040539160326d8f99a84159bbea41943ab8e960591edaaef0'}, | ||
{'numexpr-2.10.0_fix-numpy-1.x.patch': '8d70b2e95579e6f0adc07bc615144f7657b3b607f9210ec328b6622458ca726d'}, | ||
], | ||
}), | ||
('Bottleneck', '1.3.8', { | ||
'checksums': ['6780d896969ba7f53c8995ba90c87c548beb3db435dc90c60b9a10ed1ab4d868'], | ||
}), | ||
('tzdata', '2024.1', { | ||
'checksums': ['2674120f8d891909751c38abcdfd386ac0a5a1127954fbc332af6b5ceae07efd'], | ||
}), | ||
('pandas', '2.2.2', { | ||
'preinstallopts': "export PANDAS_CI=0 && ", | ||
'checksums': ['9e79019aba43cb4fda9e4d983f8e88ca0373adbb697ae9c6c43093218de28b54'], | ||
}), | ||
('mpmath', '1.3.0', { | ||
'checksums': ['7a28eb2a9774d00c7bc92411c19a89209d5da7c4c9a9e227be8330a23a25b91f'], | ||
}), | ||
('deap', '1.4.1', { | ||
'modulename': 'deap.base', | ||
'checksums': ['cc01de9892dfa7d1bc9803dab28892fead177f0182c81db47360a240ead778ff'], | ||
}), | ||
] | ||
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sanity_pip_check = True | ||
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moduleclass = 'lang' |