Merge pull request easybuilders#6383 from easybuilders/3.6.x

release EasyBuild v3.6.1
bartoldeman · May 28, 2018 · 96d4f78 · 96d4f78
2 parents e792801 + 816eb21
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diff --git a/RELEASE_NOTES b/RELEASE_NOTES
@@ -3,8 +3,46 @@ For more detailed information, please see the git log.
 
 These release notes can also be consulted at http://easybuild.readthedocs.org/en/latest/Release_notes.html.
 
-The latest version of easybuild-easyconfig provides 8,831 easyconfig files, for 1,437 different software packages,
-27 different (compiler) toolchains, 13 software bundles and 1 meta-package.
+The latest version of easybuild-easyconfig provides 8,983 easyconfig files, for 1,461 different software packages,
+30 different (compiler) toolchains, 13 software bundles and 1 meta-package.
+
+v3.6.1 (May 28th 2018)
+----------------------
+
+bugfix/update release
+- added easyconfigs for new toolchains fosscuda/2018a (#6363) and giolfc/2017b (#5799)
+- added example easyconfig files for 24 new software packages:
+  - BAGEL (#6332), Bottleneck (#6334), cisTEM (#6370), cftime (#6337), dotNET-Core-Runtime (#6345), ecCodes (#6235),
+    feh (#6300), Graphene (#5043), gffread (#6306), HOME (#6227), HiCExplorer (#6342), ICU (#6371), Imlib2 (#6300),
+    KmerGenie (#5929), libgeotiff (#6262), NetPIPE (#6062), Pandoc (#6247), Pisces (#6347), Proteinortho (#6333),
+    pyshp (#6364), SIMPLE (#6019), STIR (#6349), SimpleElastix (#6114), wxWidgets (#6370)
+- added additional easyconfigs for various supported software packages, including:
+  - Boost 1.67.0, ESMF 7.1.0r, GATK 4.0.4.0, GCC 8.1.0, GROMACS 2018, OpenBLAS 0.3.0, PETSc 3.9.1, PGI 18.4,
+    TensorFlow 1.8.0, WIEN2k 17.1
+- minor enhancements, including:
+  - add py_expression_eval extension to (recent) Python 2.7.14 & 3.6.4 easyconfigs (#6285)
+  - add README for Java with information on downloading source tarball (#6294)
+  - add several extensions to Perl 5.26.1 easyconfigs, incl Dist::Zilla & dependencies (#6297)
+  - also include archive URLs for Bioconductor 3.6 (#6311)
+  - add README.md file for installing icc/ifort (#6317)
+- various bug fixes, including:
+  - consistently specify 'intel-mkl' component in recent Intel MKL easyconfigs (#6234)
+  - add pkg-config as build dependency to libdrm (#6243)
+  - add pkg-config build dep to most recent libdrm easyconfigs (#6244)
+  - fix checksum for foreign extension in R 3.4.3 and R 3.4.4 easyconfigs (#6245)
+  - fix installation of Libint 2.4.2 by building with -std=c++11 (#6251)
+  - fix source spec for networkx 2.1 extension in scikit-image easyconfig (#6254)
+  - avoid that Nipype downloads dependencies for included extensions (#6261, #6263)
+  - consistently include patch for FLTK 1.3.4 (#6265)
+  - fix Perl shebang in MCL v14.137 scripts (#6269)
+  - add patch to build particular source file of matrixStats extension in R 3.4.4 easyconfig with -O1 to work around ICE in Skylake systems (#6278)
+  - add pkg-config build dependency to FFmpeg >= 3.3.1 (#6291)
+  - change back checksum for libdap 3.19.1 (#6305)
+  - add patch for Automake 1.15 to fix issue with recent Perl versions (#6358)
+  - fix ``glog`` causing intel error in Intel compilers on Intel Skylake (#6360)
+  - include ICU as dependency in recent R easyconfigs (v3.4.3 & v3.4.4) (#6371)
+  - fix checksum for RSEM 1.3.0 after sneaky re-release (#6379)
+
 
 v3.6.0 (April 26th 2018)
 ------------------------

diff --git a/easybuild/easyconfigs/a/ANTLR/ANTLR-2.7.7-foss-2017b.eb b/easybuild/easyconfigs/a/ANTLR/ANTLR-2.7.7-foss-2017b.eb
@@ -0,0 +1,31 @@
+easyblock = 'ConfigureMake'
+
+name = 'ANTLR'
+version = '2.7.7'
+
+homepage = 'http://www.antlr2.org/'
+description = """ANTLR, ANother Tool for Language Recognition, (formerly PCCTS)
+ is a language tool that provides a framework for constructing recognizers,
+ compilers, and translators from grammatical descriptions containing
+ Java, C#, C++, or Python actions."""
+
+toolchain = {'name': 'foss', 'version': '2017b'}
+
+source_urls = ['http://www.antlr2.org/download/']
+sources = [SOURCELOWER_TAR_GZ]
+patches = ['%(name)s-%(version)s_includes.patch']
+checksums = [
+    '853aeb021aef7586bda29e74a6b03006bcb565a755c86b66032d8ec31b67dbb9',  # antlr-2.7.7.tar.gz
+    'd167d3248a03301bc93efcb37d5df959aae6794968e42231af0b0dd26d6a2e66',  # ANTLR-2.7.7_includes.patch
+]
+
+dependencies = [('Java', '1.8.0_152', '', True)]
+
+configopts = '--disable-examples --disable-csharp --disable-python'
+
+sanity_check_paths = {
+    'files': ['bin/antlr', 'bin/antlr-config'],
+    'dirs': ['include'],
+}
+
+moduleclass = 'tools'
diff --git a/easybuild/easyconfigs/a/Automake/Automake-1.15-GCC-4.7.2.eb b/easybuild/easyconfigs/a/Automake/Automake-1.15-GCC-4.7.2.eb
@@ -22,7 +22,11 @@ toolchain = {'name': 'GCC', 'version': '4.7.2'}
 
 source_urls = [GNU_SOURCE]
 sources = [SOURCELOWER_TAR_GZ]
-checksums = ['7946e945a96e28152ba5a6beb0625ca715c6e32ac55f2e353ef54def0c8ed924']
+patches = ['Automake-%(version)s-fix-brace.patch']
+checksums = [
+    '7946e945a96e28152ba5a6beb0625ca715c6e32ac55f2e353ef54def0c8ed924',  # automake-1.15.tar.gz
+    '9f72b339934d546ba8f8486d3ca601601a298963b66a20474245df524acaf0d7',  # Automake-1.15-fix-brace.patch
+]
 
 dependencies = [('Autoconf', '2.69')]
 

diff --git a/easybuild/easyconfigs/a/Automake/Automake-1.15-GCC-4.8.4.eb b/easybuild/easyconfigs/a/Automake/Automake-1.15-GCC-4.8.4.eb
@@ -22,7 +22,11 @@ toolchain = {'name': 'GCC', 'version': '4.8.4'}
 
 source_urls = [GNU_SOURCE]
 sources = [SOURCELOWER_TAR_GZ]
-checksums = ['7946e945a96e28152ba5a6beb0625ca715c6e32ac55f2e353ef54def0c8ed924']
+patches = ['Automake-%(version)s-fix-brace.patch']
+checksums = [
+    '7946e945a96e28152ba5a6beb0625ca715c6e32ac55f2e353ef54def0c8ed924',  # automake-1.15.tar.gz
+    '9f72b339934d546ba8f8486d3ca601601a298963b66a20474245df524acaf0d7',  # Automake-1.15-fix-brace.patch
+]
 
 dependencies = [('Autoconf', '2.69')]
 

diff --git a/easybuild/easyconfigs/a/Automake/Automake-1.15-GCC-4.9.2.eb b/easybuild/easyconfigs/a/Automake/Automake-1.15-GCC-4.9.2.eb
@@ -22,7 +22,11 @@ toolchain = {'name': 'GCC', 'version': '4.9.2'}
 
 source_urls = [GNU_SOURCE]
 sources = [SOURCELOWER_TAR_GZ]
-checksums = ['7946e945a96e28152ba5a6beb0625ca715c6e32ac55f2e353ef54def0c8ed924']
+patches = ['Automake-%(version)s-fix-brace.patch']
+checksums = [
+    '7946e945a96e28152ba5a6beb0625ca715c6e32ac55f2e353ef54def0c8ed924',  # automake-1.15.tar.gz
+    '9f72b339934d546ba8f8486d3ca601601a298963b66a20474245df524acaf0d7',  # Automake-1.15-fix-brace.patch
+]
 
 dependencies = [('Autoconf', '2.69')]
 

diff --git a/easybuild/easyconfigs/a/Automake/Automake-1.15-GCC-4.9.3-2.25.eb b/easybuild/easyconfigs/a/Automake/Automake-1.15-GCC-4.9.3-2.25.eb
@@ -22,7 +22,11 @@ toolchain = {'name': 'GCC', 'version': '4.9.3-2.25'}
 
 source_urls = [GNU_SOURCE]
 sources = [SOURCELOWER_TAR_GZ]
-checksums = ['7946e945a96e28152ba5a6beb0625ca715c6e32ac55f2e353ef54def0c8ed924']
+patches = ['Automake-%(version)s-fix-brace.patch']
+checksums = [
+    '7946e945a96e28152ba5a6beb0625ca715c6e32ac55f2e353ef54def0c8ed924',  # automake-1.15.tar.gz
+    '9f72b339934d546ba8f8486d3ca601601a298963b66a20474245df524acaf0d7',  # Automake-1.15-fix-brace.patch
+]
 
 dependencies = [('Autoconf', '2.69')]
 

diff --git a/easybuild/easyconfigs/a/Automake/Automake-1.15-GCC-4.9.3.eb b/easybuild/easyconfigs/a/Automake/Automake-1.15-GCC-4.9.3.eb
@@ -22,7 +22,11 @@ toolchain = {'name': 'GCC', 'version': '4.9.3'}
 
 source_urls = [GNU_SOURCE]
 sources = [SOURCELOWER_TAR_GZ]
-checksums = ['7946e945a96e28152ba5a6beb0625ca715c6e32ac55f2e353ef54def0c8ed924']
+patches = ['Automake-%(version)s-fix-brace.patch']
+checksums = [
+    '7946e945a96e28152ba5a6beb0625ca715c6e32ac55f2e353ef54def0c8ed924',  # automake-1.15.tar.gz
+    '9f72b339934d546ba8f8486d3ca601601a298963b66a20474245df524acaf0d7',  # Automake-1.15-fix-brace.patch
+]
 
 dependencies = [('Autoconf', '2.69')]
 

diff --git a/easybuild/easyconfigs/a/Automake/Automake-1.15-GCC-5.2.0.eb b/easybuild/easyconfigs/a/Automake/Automake-1.15-GCC-5.2.0.eb
@@ -22,7 +22,11 @@ toolchain = {'name': 'GCC', 'version': '5.2.0'}
 
 source_urls = [GNU_SOURCE]
 sources = [SOURCELOWER_TAR_GZ]
-checksums = ['7946e945a96e28152ba5a6beb0625ca715c6e32ac55f2e353ef54def0c8ed924']
+patches = ['Automake-%(version)s-fix-brace.patch']
+checksums = [
+    '7946e945a96e28152ba5a6beb0625ca715c6e32ac55f2e353ef54def0c8ed924',  # automake-1.15.tar.gz
+    '9f72b339934d546ba8f8486d3ca601601a298963b66a20474245df524acaf0d7',  # Automake-1.15-fix-brace.patch
+]
 
 dependencies = [('Autoconf', '2.69')]
 

diff --git a/easybuild/easyconfigs/a/Automake/Automake-1.15-GCC-5.4.0-2.26.eb b/easybuild/easyconfigs/a/Automake/Automake-1.15-GCC-5.4.0-2.26.eb
@@ -22,7 +22,11 @@ toolchain = {'name': 'GCC', 'version': '5.4.0-2.26'}
 
 source_urls = [GNU_SOURCE]
 sources = [SOURCELOWER_TAR_GZ]
-checksums = ['7946e945a96e28152ba5a6beb0625ca715c6e32ac55f2e353ef54def0c8ed924']
+patches = ['Automake-%(version)s-fix-brace.patch']
+checksums = [
+    '7946e945a96e28152ba5a6beb0625ca715c6e32ac55f2e353ef54def0c8ed924',  # automake-1.15.tar.gz
+    '9f72b339934d546ba8f8486d3ca601601a298963b66a20474245df524acaf0d7',  # Automake-1.15-fix-brace.patch
+]
 
 dependencies = [('Autoconf', '2.69')]
 

diff --git a/easybuild/easyconfigs/a/Automake/Automake-1.15-GCCcore-4.9.2.eb b/easybuild/easyconfigs/a/Automake/Automake-1.15-GCCcore-4.9.2.eb
@@ -22,7 +22,11 @@ toolchain = {'name': 'GCCcore', 'version': '4.9.2'}
 
 source_urls = [GNU_SOURCE]
 sources = [SOURCELOWER_TAR_GZ]
-checksums = ['7946e945a96e28152ba5a6beb0625ca715c6e32ac55f2e353ef54def0c8ed924']
+patches = ['Automake-%(version)s-fix-brace.patch']
+checksums = [
+    '7946e945a96e28152ba5a6beb0625ca715c6e32ac55f2e353ef54def0c8ed924',  # automake-1.15.tar.gz
+    '9f72b339934d546ba8f8486d3ca601601a298963b66a20474245df524acaf0d7',  # Automake-1.15-fix-brace.patch
+]
 
 dependencies = [('Autoconf', '2.69')]
 

diff --git a/easybuild/easyconfigs/a/Automake/Automake-1.15-GCCcore-4.9.3.eb b/easybuild/easyconfigs/a/Automake/Automake-1.15-GCCcore-4.9.3.eb
@@ -22,7 +22,11 @@ toolchain = {'name': 'GCCcore', 'version': '4.9.3'}
 
 source_urls = [GNU_SOURCE]
 sources = [SOURCELOWER_TAR_GZ]
-checksums = ['7946e945a96e28152ba5a6beb0625ca715c6e32ac55f2e353ef54def0c8ed924']
+patches = ['Automake-%(version)s-fix-brace.patch']
+checksums = [
+    '7946e945a96e28152ba5a6beb0625ca715c6e32ac55f2e353ef54def0c8ed924',  # automake-1.15.tar.gz
+    '9f72b339934d546ba8f8486d3ca601601a298963b66a20474245df524acaf0d7',  # Automake-1.15-fix-brace.patch
+]
 
 builddependencies = [('binutils', '2.25')]
 dependencies = [('Autoconf', '2.69')]

diff --git a/easybuild/easyconfigs/a/Automake/Automake-1.15-GCCcore-5.3.0.eb b/easybuild/easyconfigs/a/Automake/Automake-1.15-GCCcore-5.3.0.eb
@@ -22,7 +22,11 @@ toolchain = {'name': 'GCCcore', 'version': '5.3.0'}
 
 source_urls = [GNU_SOURCE]
 sources = [SOURCELOWER_TAR_GZ]
-checksums = ['7946e945a96e28152ba5a6beb0625ca715c6e32ac55f2e353ef54def0c8ed924']
+patches = ['Automake-%(version)s-fix-brace.patch']
+checksums = [
+    '7946e945a96e28152ba5a6beb0625ca715c6e32ac55f2e353ef54def0c8ed924',  # automake-1.15.tar.gz
+    '9f72b339934d546ba8f8486d3ca601601a298963b66a20474245df524acaf0d7',  # Automake-1.15-fix-brace.patch
+]
 
 dependencies = [('Autoconf', '2.69')]
 

diff --git a/easybuild/easyconfigs/a/Automake/Automake-1.15-GCCcore-5.4.0.eb b/easybuild/easyconfigs/a/Automake/Automake-1.15-GCCcore-5.4.0.eb
@@ -22,7 +22,11 @@ toolchain = {'name': 'GCCcore', 'version': '5.4.0'}
 
 source_urls = [GNU_SOURCE]
 sources = [SOURCELOWER_TAR_GZ]
-checksums = ['7946e945a96e28152ba5a6beb0625ca715c6e32ac55f2e353ef54def0c8ed924']
+patches = ['Automake-%(version)s-fix-brace.patch']
+checksums = [
+    '7946e945a96e28152ba5a6beb0625ca715c6e32ac55f2e353ef54def0c8ed924',  # automake-1.15.tar.gz
+    '9f72b339934d546ba8f8486d3ca601601a298963b66a20474245df524acaf0d7',  # Automake-1.15-fix-brace.patch
+]
 
 dependencies = [('Autoconf', '2.69')]
 

diff --git a/easybuild/easyconfigs/a/Automake/Automake-1.15-GCCcore-6.1.0.eb b/easybuild/easyconfigs/a/Automake/Automake-1.15-GCCcore-6.1.0.eb
@@ -22,7 +22,11 @@ toolchain = {'name': 'GCCcore', 'version': '6.1.0'}
 
 source_urls = [GNU_SOURCE]
 sources = [SOURCELOWER_TAR_GZ]
-checksums = ['7946e945a96e28152ba5a6beb0625ca715c6e32ac55f2e353ef54def0c8ed924']
+patches = ['Automake-%(version)s-fix-brace.patch']
+checksums = [
+    '7946e945a96e28152ba5a6beb0625ca715c6e32ac55f2e353ef54def0c8ed924',  # automake-1.15.tar.gz
+    '9f72b339934d546ba8f8486d3ca601601a298963b66a20474245df524acaf0d7',  # Automake-1.15-fix-brace.patch
+]
 
 dependencies = [('Autoconf', '2.69')]
 

diff --git a/easybuild/easyconfigs/a/Automake/Automake-1.15-GCCcore-6.2.0.eb b/easybuild/easyconfigs/a/Automake/Automake-1.15-GCCcore-6.2.0.eb
@@ -22,7 +22,11 @@ toolchain = {'name': 'GCCcore', 'version': '6.2.0'}
 
 source_urls = [GNU_SOURCE]
 sources = [SOURCELOWER_TAR_GZ]
-checksums = ['7946e945a96e28152ba5a6beb0625ca715c6e32ac55f2e353ef54def0c8ed924']
+patches = ['Automake-%(version)s-fix-brace.patch']
+checksums = [
+    '7946e945a96e28152ba5a6beb0625ca715c6e32ac55f2e353ef54def0c8ed924',  # automake-1.15.tar.gz
+    '9f72b339934d546ba8f8486d3ca601601a298963b66a20474245df524acaf0d7',  # Automake-1.15-fix-brace.patch
+]
 
 dependencies = [('Autoconf', '2.69')]
 

diff --git a/easybuild/easyconfigs/a/Automake/Automake-1.15-GCCcore-6.3.0.eb b/easybuild/easyconfigs/a/Automake/Automake-1.15-GCCcore-6.3.0.eb
@@ -22,7 +22,11 @@ toolchain = {'name': 'GCCcore', 'version': '6.3.0'}
 
 source_urls = [GNU_SOURCE]
 sources = [SOURCELOWER_TAR_GZ]
-checksums = ['7946e945a96e28152ba5a6beb0625ca715c6e32ac55f2e353ef54def0c8ed924']
+patches = ['Automake-%(version)s-fix-brace.patch']
+checksums = [
+    '7946e945a96e28152ba5a6beb0625ca715c6e32ac55f2e353ef54def0c8ed924',  # automake-1.15.tar.gz
+    '9f72b339934d546ba8f8486d3ca601601a298963b66a20474245df524acaf0d7',  # Automake-1.15-fix-brace.patch
+]
 
 dependencies = [('Autoconf', '2.69')]
 

diff --git a/easybuild/easyconfigs/a/Automake/Automake-1.15-GNU-4.9.2-2.25.eb b/easybuild/easyconfigs/a/Automake/Automake-1.15-GNU-4.9.2-2.25.eb
@@ -22,7 +22,11 @@ toolchain = {'name': 'GNU', 'version': '4.9.2-2.25'}
 
 source_urls = [GNU_SOURCE]
 sources = [SOURCELOWER_TAR_GZ]
-checksums = ['7946e945a96e28152ba5a6beb0625ca715c6e32ac55f2e353ef54def0c8ed924']
+patches = ['Automake-%(version)s-fix-brace.patch']
+checksums = [
+    '7946e945a96e28152ba5a6beb0625ca715c6e32ac55f2e353ef54def0c8ed924',  # automake-1.15.tar.gz
+    '9f72b339934d546ba8f8486d3ca601601a298963b66a20474245df524acaf0d7',  # Automake-1.15-fix-brace.patch
+]
 
 dependencies = [('Autoconf', '2.69')]
 

diff --git a/easybuild/easyconfigs/a/Automake/Automake-1.15-GNU-4.9.3-2.25.eb b/easybuild/easyconfigs/a/Automake/Automake-1.15-GNU-4.9.3-2.25.eb
@@ -22,7 +22,11 @@ toolchain = {'name': 'GNU', 'version': '4.9.3-2.25'}
 
 source_urls = [GNU_SOURCE]
 sources = [SOURCELOWER_TAR_GZ]
-checksums = ['7946e945a96e28152ba5a6beb0625ca715c6e32ac55f2e353ef54def0c8ed924']
+patches = ['Automake-%(version)s-fix-brace.patch']
+checksums = [
+    '7946e945a96e28152ba5a6beb0625ca715c6e32ac55f2e353ef54def0c8ed924',  # automake-1.15.tar.gz
+    '9f72b339934d546ba8f8486d3ca601601a298963b66a20474245df524acaf0d7',  # Automake-1.15-fix-brace.patch
+]
 
 dependencies = [('Autoconf', '2.69')]
 

diff --git a/easybuild/easyconfigs/a/Automake/Automake-1.15-GNU-5.1.0-2.25.eb b/easybuild/easyconfigs/a/Automake/Automake-1.15-GNU-5.1.0-2.25.eb
@@ -22,7 +22,11 @@ toolchain = {'name': 'GNU', 'version': '5.1.0-2.25'}
 
 source_urls = [GNU_SOURCE]
 sources = [SOURCELOWER_TAR_GZ]
-checksums = ['7946e945a96e28152ba5a6beb0625ca715c6e32ac55f2e353ef54def0c8ed924']
+patches = ['Automake-%(version)s-fix-brace.patch']
+checksums = [
+    '7946e945a96e28152ba5a6beb0625ca715c6e32ac55f2e353ef54def0c8ed924',  # automake-1.15.tar.gz
+    '9f72b339934d546ba8f8486d3ca601601a298963b66a20474245df524acaf0d7',  # Automake-1.15-fix-brace.patch
+]
 
 dependencies = [('Autoconf', '2.69')]
 

diff --git a/easybuild/easyconfigs/a/Automake/Automake-1.15-fix-brace.patch b/easybuild/easyconfigs/a/Automake/Automake-1.15-fix-brace.patch
@@ -0,0 +1,19 @@
+Without this change, Perl 5.22 complains "Unescaped left brace in
+regex is deprecated" and this is planned to become a hard error in
+Perl 5.26.  See:
+http://search.cpan.org/dist/perl-5.22.0/pod/perldelta.pod#A_literal_%22{%22_should_now_be_escaped_in_a_pattern
+* bin/automake.in (substitute_ac_subst_variables): Escape left brace.
+
+Backported from:
+http://git.savannah.gnu.org/cgit/automake.git/commit/?id=13f00eb4493c217269b76614759e452d8302955e
+Original author: Paul Eggert <[email protected]>
+--- a/bin/automake.in
++++ b/bin/automake.in
+@@ -3878,7 +3878,7 @@
+ sub substitute_ac_subst_variables
+ {
+   my ($text) = @_;
+-  $text =~ s/\${([^ \t=:+{}]+)}/substitute_ac_subst_variables_worker ($1)/ge;
++  $text =~ s/\$\{([^ \t=:+{}]+)\}/substitute_ac_subst_variables_worker ($1)/ge;
+   return $text;
+ }
diff --git a/easybuild/easyconfigs/a/Automake/Automake-1.15-foss-2015a.eb b/easybuild/easyconfigs/a/Automake/Automake-1.15-foss-2015a.eb
@@ -22,7 +22,11 @@ toolchain = {'name': 'foss', 'version': '2015a'}
 
 source_urls = [GNU_SOURCE]
 sources = [SOURCELOWER_TAR_GZ]
-checksums = ['7946e945a96e28152ba5a6beb0625ca715c6e32ac55f2e353ef54def0c8ed924']
+patches = ['Automake-%(version)s-fix-brace.patch']
+checksums = [
+    '7946e945a96e28152ba5a6beb0625ca715c6e32ac55f2e353ef54def0c8ed924',  # automake-1.15.tar.gz
+    '9f72b339934d546ba8f8486d3ca601601a298963b66a20474245df524acaf0d7',  # Automake-1.15-fix-brace.patch
+]
 
 dependencies = [('Autoconf', '2.69')]
 

diff --git a/easybuild/easyconfigs/a/Automake/Automake-1.15-foss-2015b.eb b/easybuild/easyconfigs/a/Automake/Automake-1.15-foss-2015b.eb
@@ -22,7 +22,11 @@ toolchain = {'name': 'foss', 'version': '2015b'}
 
 source_urls = [GNU_SOURCE]
 sources = [SOURCELOWER_TAR_GZ]
-checksums = ['7946e945a96e28152ba5a6beb0625ca715c6e32ac55f2e353ef54def0c8ed924']
+patches = ['Automake-%(version)s-fix-brace.patch']
+checksums = [
+    '7946e945a96e28152ba5a6beb0625ca715c6e32ac55f2e353ef54def0c8ed924',  # automake-1.15.tar.gz
+    '9f72b339934d546ba8f8486d3ca601601a298963b66a20474245df524acaf0d7',  # Automake-1.15-fix-brace.patch
+]
 
 dependencies = [('Autoconf', '2.69')]
 

diff --git a/easybuild/easyconfigs/a/Automake/Automake-1.15-foss-2016.04.eb b/easybuild/easyconfigs/a/Automake/Automake-1.15-foss-2016.04.eb
@@ -22,7 +22,11 @@ toolchain = {'name': 'foss', 'version': '2016.04'}
 
 source_urls = [GNU_SOURCE]
 sources = [SOURCELOWER_TAR_GZ]
-checksums = ['7946e945a96e28152ba5a6beb0625ca715c6e32ac55f2e353ef54def0c8ed924']
+patches = ['Automake-%(version)s-fix-brace.patch']
+checksums = [
+    '7946e945a96e28152ba5a6beb0625ca715c6e32ac55f2e353ef54def0c8ed924',  # automake-1.15.tar.gz
+    '9f72b339934d546ba8f8486d3ca601601a298963b66a20474245df524acaf0d7',  # Automake-1.15-fix-brace.patch
+]
 
 dependencies = [('Autoconf', '2.69')]
 

diff --git a/easybuild/easyconfigs/a/Automake/Automake-1.15-foss-2016a.eb b/easybuild/easyconfigs/a/Automake/Automake-1.15-foss-2016a.eb
@@ -22,7 +22,11 @@ toolchain = {'name': 'foss', 'version': '2016a'}
 
 source_urls = [GNU_SOURCE]
 sources = [SOURCELOWER_TAR_GZ]
-checksums = ['7946e945a96e28152ba5a6beb0625ca715c6e32ac55f2e353ef54def0c8ed924']
+patches = ['Automake-%(version)s-fix-brace.patch']
+checksums = [
+    '7946e945a96e28152ba5a6beb0625ca715c6e32ac55f2e353ef54def0c8ed924',  # automake-1.15.tar.gz
+    '9f72b339934d546ba8f8486d3ca601601a298963b66a20474245df524acaf0d7',  # Automake-1.15-fix-brace.patch
+]
 
 dependencies = [('Autoconf', '2.69')]
 

diff --git a/easybuild/easyconfigs/a/Automake/Automake-1.15-foss-2016b.eb b/easybuild/easyconfigs/a/Automake/Automake-1.15-foss-2016b.eb
@@ -22,7 +22,11 @@ toolchain = {'name': 'foss', 'version': '2016b'}
 
 source_urls = [GNU_SOURCE]
 sources = [SOURCELOWER_TAR_GZ]
-checksums = ['7946e945a96e28152ba5a6beb0625ca715c6e32ac55f2e353ef54def0c8ed924']
+patches = ['Automake-%(version)s-fix-brace.patch']
+checksums = [
+    '7946e945a96e28152ba5a6beb0625ca715c6e32ac55f2e353ef54def0c8ed924',  # automake-1.15.tar.gz
+    '9f72b339934d546ba8f8486d3ca601601a298963b66a20474245df524acaf0d7',  # Automake-1.15-fix-brace.patch
+]
 
 dependencies = [('Autoconf', '2.69')]
 

diff --git a/easybuild/easyconfigs/a/Automake/Automake-1.15-gimkl-2.11.5.eb b/easybuild/easyconfigs/a/Automake/Automake-1.15-gimkl-2.11.5.eb
@@ -22,7 +22,11 @@ toolchain = {'name': 'gimkl', 'version': '2.11.5'}
 
 source_urls = [GNU_SOURCE]
 sources = [SOURCELOWER_TAR_GZ]
-checksums = ['7946e945a96e28152ba5a6beb0625ca715c6e32ac55f2e353ef54def0c8ed924']
+patches = ['Automake-%(version)s-fix-brace.patch']
+checksums = [
+    '7946e945a96e28152ba5a6beb0625ca715c6e32ac55f2e353ef54def0c8ed924',  # automake-1.15.tar.gz
+    '9f72b339934d546ba8f8486d3ca601601a298963b66a20474245df524acaf0d7',  # Automake-1.15-fix-brace.patch
+]
 
 dependencies = [('Autoconf', '2.69')]