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Merge pull request #5807 from ryanlovett/jsp-4.2.0
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Bump jupyter-server-proxy for security update.
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ryanlovett authored Jun 17, 2024
2 parents fe723f4 + 7022c95 commit 2f6c030
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Showing 15 changed files with 21 additions and 15 deletions.
2 changes: 1 addition & 1 deletion deployments/astro/image/environment.yml
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Expand Up @@ -6,7 +6,7 @@ channels:

dependencies:
- python=3.11.*
- jupyter-server-proxy==4.1.2
- jupyter-server-proxy==4.2.0
# A linux desktop environment
- websockify

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8 changes: 7 additions & 1 deletion deployments/biology/image/bio1b-packages.bash
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@@ -1,5 +1,11 @@
# Install PAUP* for BIO 1B
# https://github.com/berkeley-dsep-infra/datahub/issues/1699
wget http://phylosolutions.com/paup-test/paup4a168_ubuntu64.gz -O ${CONDA_DIR}/bin/paup.gz

# This package was requested in 2020 for the instructor to try out.
# The 168 version doesn't exist so I've bumped it to 169, but also disabled
# it in case the package is no longer needed.
return

wget https://phylosolutions.com/paup-test/paup4a169_ubuntu64.gz -O ${CONDA_DIR}/bin/paup.gz
gunzip ${CONDA_DIR}/bin/paup.gz
chmod +x ${CONDA_DIR}/bin/paup
2 changes: 1 addition & 1 deletion deployments/biology/image/environment.yml
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Expand Up @@ -9,7 +9,7 @@ dependencies:
- nb_conda_kernels=2.3.1

# proxy web applications
- jupyter-server-proxy==4.1.2
- jupyter-server-proxy==4.2.0
- jupyter-rsession-proxy==2.0.1

# Packages from bioconda for IB134L
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2 changes: 1 addition & 1 deletion deployments/cee/image/environment.yml
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Expand Up @@ -5,7 +5,7 @@ channels:
# Only libraries *not* available in PyPI should be here
dependencies:
- python=3.11.*
- jupyter-server-proxy==4.1.2
- jupyter-server-proxy==4.2.0
#adding math functionality
- matplotlib=3.7.*
- scipy=1.10.*
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2 changes: 1 addition & 1 deletion deployments/data101/image/environment.yml
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Expand Up @@ -34,7 +34,7 @@ dependencies:
- jupyter-archive==3.4.0
- jupyter-book==0.15.1
- jupyter-resource-usage==1.0.0
- jupyter-server-proxy==4.1.2
- jupyter-server-proxy==4.2.0
- jupyter_bokeh
- jupyterlab==4.0.11
- jupyterlab-favorites==3.0.0
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2 changes: 1 addition & 1 deletion deployments/datahub/images/default/environment.yml
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Expand Up @@ -73,7 +73,7 @@ dependencies:

# data8; foundation
- datascience==0.17.6
- jupyter-server-proxy==4.1.2
- jupyter-server-proxy==4.2.0
- jupyter-rsession-proxy==2.2.0
- folium==0.12.1.post1

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2 changes: 1 addition & 1 deletion deployments/dev/images/default/environment.yml
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Expand Up @@ -5,7 +5,7 @@ dependencies:
# bug w/notebook and traitlets: https://github.com/jupyter/notebook/issues/7048
- traitlets=5.9.*

- jupyter-server-proxy==4.1.2
- jupyter-server-proxy==4.2.0
- jupyter-rsession-proxy==2.2.0

- syncthing==1.23.5
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2 changes: 1 addition & 1 deletion deployments/eecs/image/environment.yml
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Expand Up @@ -7,7 +7,7 @@ dependencies:
- python=3.11.*
- nbclassic==1.0.0

- jupyter-server-proxy==4.1.2
- jupyter-server-proxy==4.2.0
# Visual Studio Code!
- jupyter-vscode-proxy=0.1
- code-server=4.5.2
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2 changes: 1 addition & 1 deletion deployments/ischool/image/environment.yml
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Expand Up @@ -8,7 +8,7 @@ dependencies:
- jupyter-rsession-proxy==2.2.0
# https://github.com/berkeley-dsep-infra/datahub/issues/5251
- nodejs=16 # code-server requires node < 17
- jupyter-server-proxy==4.1.2
- jupyter-server-proxy==4.2.0
- jupyter-vscode-proxy==0.5
- code-server==4.10.1
# bug w/notebook and traitlets: https://github.com/jupyter/notebook/issues/7048
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2 changes: 1 addition & 1 deletion deployments/julia/image/environment.yml
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@@ -1,5 +1,5 @@
dependencies:
- jupyter-server-proxy==4.1.2
- jupyter-server-proxy==4.2.0
- nodejs==20.8.1
- pip==22.3.1
- python==3.11.*
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2 changes: 1 addition & 1 deletion deployments/julia/image/install-julia-packages.jl
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Expand Up @@ -15,7 +15,7 @@ Pkg.add.([
Pkg.PackageSpec(;name="VegaLite", version="2.6.0"),
Pkg.PackageSpec(;name="CSVFiles", version="1.0.1"),
Pkg.PackageSpec(;name="Distributions", version="0.23.11"),
Pkg.PackageSpec(;name="DataFrames", version="0.21.8"),
Pkg.PackageSpec(;name="DataFrames"),
Pkg.PackageSpec(;name="Plots", version="1.24.3"),
Pkg.PackageSpec(;name="Images", version="0.24.1"),
Pkg.PackageSpec(;name="PyPlot", version="2.10.0"),
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2 changes: 1 addition & 1 deletion deployments/publichealth/image/environment.yml
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@@ -1,7 +1,7 @@
dependencies:
- pip
- syncthing==1.18.6
- jupyter-server-proxy==4.1.2
- jupyter-server-proxy==4.2.0
- jupyter-rsession-proxy==2.2.0
- pip:
# bug w/notebook and traitlets: https://github.com/jupyter/notebook/issues/7048
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2 changes: 1 addition & 1 deletion deployments/shiny/image/environment.yml
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Expand Up @@ -3,7 +3,7 @@ dependencies:
- ipywidgets==8.1.2
- jupyter-archive==3.4.0
- jupyter-resource-usage==1.0.1
- jupyter-server-proxy==4.1.2
- jupyter-server-proxy==4.2.0
- jupyter-rsession-proxy==2.2.0
- jupyter-syncthing-proxy==1.0.3
- jupyterhub==4.1.5
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2 changes: 1 addition & 1 deletion deployments/stat159/image/environment.yml
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Expand Up @@ -137,7 +137,7 @@ dependencies:
- syncthing==1.23.0
- websockify==0.11.0

- jupyter-server-proxy==4.1.2
- jupyter-server-proxy==4.2.0
# VS Code support
- jupyter-vscode-proxy==0.2
- code-server==4.10.1
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2 changes: 1 addition & 1 deletion deployments/stat20/image/environment.yml
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Expand Up @@ -5,7 +5,7 @@ channels:

dependencies:
- syncthing==1.22.2
- jupyter-server-proxy==4.1.2
- jupyter-server-proxy==4.2.0
- jupyter-rsession-proxy==2.2.0
# bug w/notebook and traitlets: https://github.com/jupyter/notebook/issues/7048
- traitlets=5.9.*
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