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break out the apt R install steps for debugging/unsticking #5338

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merged 2 commits into from
Jan 3, 2024
Merged

break out the apt R install steps for debugging/unsticking #5338

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660d329
break out the apt R install steps for debugging/unsticking
shaneknapp Jan 3, 2024
a662e29
bump R, reconstruct apt-get install line
shaneknapp Jan 3, 2024
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9 changes: 3 additions & 6 deletions deployments/datahub/images/default/Dockerfile
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Expand Up @@ -38,16 +38,13 @@ RUN install -d -o ${NB_USER} -g ${NB_USER} ${R_LIBS_USER}
# These packages must be installed into the base stage since they are in system
# paths rather than /srv.
# Pre-built R packages from rspm are built against system libs in jammy.
ENV R_VERSION=4.3.1-1.2204.0
ENV R_VERSION=4.3.2-1.2204.0
ENV LITTLER_VERSION=0.3.18-2.2204.0
RUN apt-key adv --keyserver keyserver.ubuntu.com --recv-keys E298A3A825C0D65DFD57CBB651716619E084DAB9
RUN echo "deb https://cloud.r-project.org/bin/linux/ubuntu jammy-cran40/" > /etc/apt/sources.list.d/cran.list
RUN curl --silent --location --fail https://cloud.r-project.org/bin/linux/ubuntu/marutter_pubkey.asc > /etc/apt/trusted.gpg.d/cran_ubuntu_key.asc
RUN apt-get update -qq --yes > /dev/null && \
apt-get install --yes -qq \
r-base-core=${R_VERSION} \
r-base-dev=${R_VERSION} \
littler=${LITTLER_VERSION} > /dev/null
RUN apt-get update --yes > /dev/null && \
apt-get install --yes -qq r-base-core=${R_VERSION} r-base-dev=${R_VERSION} littler=${LITTLER_VERSION} > /dev/null

ENV RSTUDIO_URL https://download2.rstudio.org/server/jammy/amd64/rstudio-server-2023.06.0-421-amd64.deb
RUN curl --silent --location --fail ${RSTUDIO_URL} > /tmp/rstudio.deb && \
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