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chore: release 0.5.0 #204

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chore: release 0.5.0 #204

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@github-actions github-actions bot commented Nov 27, 2023

🤖 I have created a release *beep* *boop*

0.5.0 (2024-09-02)

Features

  • Add common functions for interfacing with python-irodsclient (#202) (67e6e49)
  • Add generic SODAR ingest command (#199) (8548c97)
  • Add new command sodar landing-zone-validate (#219) (98e21c1)
  • Adding cubi-tk snappy itransfer_sv_calling (#213) (5a00e40)
  • allow varfish case resubmission (#224) (964bcac)
  • irods download refactoring and new generic sodar downloader with preset for dragen data (#226 ) (#227) (3fc38af)
  • presets for cubi-tk sodar ingest-fastq (#232 ) (#235) (8669118)
  • Switching cubi-tk sodar ingest-fastq from icommands to irods_common (#217) (cd9a3b9)
  • Update ingest-fastq, allow to match samples against assay table to determine collections names (#198) (#203) (8b3662d)

Bug Fixes

  • adapt to varfish-cli >=0.6.2 syntax (#221) (9619609)
  • isa-tab add-ped now only modifies values on process nodes of ped-supplied samples #207 (#233) (88977d4)
  • parsing snappy config for with WGS projects (#231) (10592f3)
  • varfish cli 06x uses new import syntax (#220) (#222) (cb10dbb)
  • varfish-upload subprocess submission (#225) (0f7f5b2)

This PR was generated with Release Please. See documentation.

@github-actions github-actions bot force-pushed the release-v0.5.0 branch 2 times, most recently from 4fb64fe to 3dcfb01 Compare January 24, 2024 13:43
@github-actions github-actions bot force-pushed the release-v0.5.0 branch 5 times, most recently from 3c4bdc6 to ba2d39e Compare January 26, 2024 12:17
@github-actions github-actions bot force-pushed the release-v0.5.0 branch 2 times, most recently from 02ed997 to 2c28680 Compare February 12, 2024 07:51
@github-actions github-actions bot force-pushed the release-v0.5.0 branch 2 times, most recently from ae69052 to dd274f6 Compare June 25, 2024 16:22
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