Fix bug with deps CLI flags

bbot/scanner/preset/args.py

@@ -135,14 +135,17 @@ def preset_from_args(self):
             args_preset.core.merge_custom({"modules": {"stdout": {"event_types": self.parsed.event_types}}})
 
         # dependencies
+        deps_config = args_preset.core.custom_config.get("deps", {})
         if self.parsed.retry_deps:
-            args_preset.core.custom_config["deps_behavior"] = "retry_failed"
+            deps_config["behavior"] = "retry_failed"
         elif self.parsed.force_deps:
-            args_preset.core.custom_config["deps_behavior"] = "force_install"
+            deps_config["behavior"] = "force_install"
         elif self.parsed.no_deps:
-            args_preset.core.custom_config["deps_behavior"] = "disable"
+            deps_config["behavior"] = "disable"
         elif self.parsed.ignore_failed_deps:
-            args_preset.core.custom_config["deps_behavior"] = "ignore_failed"
+            deps_config["behavior"] = "ignore_failed"
+        if deps_config:
+            args_preset.core.merge_custom({"deps": deps_config})
 
         # other scan options
         if self.parsed.name is not None:
@@ -295,6 +298,12 @@ def create_parser(self, *args, **kwargs):
         )
 
         output = p.add_argument_group(title="Output")
+        output.add_argument(
+            "-o",
+            "--output-dir",
+            help="Directory to output scan results",
+            metavar="DIR",
+        )
         output.add_argument(
             "-om",
             "--output-modules",
@@ -304,12 +313,6 @@ def create_parser(self, *args, **kwargs):
             metavar="MODULE",
         )
         output.add_argument("-lo", "--list-output-modules", action="store_true", help="List available output modules")
-        output.add_argument(
-            "-o",
-            "--output-dir",
-            help="Directory to output scan results",
-            metavar="DIR",
-        )
         output.add_argument("--json", "-j", action="store_true", help="Output scan data in JSON format")
         output.add_argument("--brief", "-br", action="store_true", help="Output only the data itself")
         output.add_argument("--event-types", nargs="+", default=[], help="Choose which event types to display")

bbot/scanner/preset/preset.py

@@ -798,7 +798,7 @@ def to_dict(self, include_target=False, full_config=False, redact_secrets=False)
         # misc scan options
         if self.scan_name:
             preset_dict["scan_name"] = self.scan_name
-        if self.scan_name:
+        if self.scan_name and self.output_dir is not None:
             preset_dict["output_dir"] = self.output_dir
 
         # conditions

bbot/test/test_step_1/test_cli.py

@@ -1,3 +1,5 @@
+import yaml
+
 from ..bbot_fixtures import *
 
 from bbot import cli
@@ -143,6 +145,20 @@ async def test_cli_args(monkeypatch, caplog, capsys, clean_default_config):
     assert len(out.splitlines()) == 1
     assert out.count(".") > 1
 
+    # deps behavior
+    monkeypatch.setattr("sys.argv", ["bbot", "-n", "depstest", "--retry-deps", "--current-preset"])
+    result = await cli._main()
+    assert result is None
+    out, err = capsys.readouterr()
+    print(out)
+    # parse YAML output
+    preset = yaml.safe_load(out)
+    assert preset == {
+        "description": "depstest",
+        "scan_name": "depstest",
+        "config": {"deps": {"behavior": "retry_failed"}},
+    }
+
     # list modules
     monkeypatch.setattr("sys.argv", ["bbot", "--list-modules"])
     result = await cli._main()
@@ -401,7 +417,6 @@ async def test_cli_args(monkeypatch, caplog, capsys, clean_default_config):
 async def test_cli_customheaders(monkeypatch, caplog, capsys):
     monkeypatch.setattr(sys, "exit", lambda *args, **kwargs: True)
     monkeypatch.setattr(os, "_exit", lambda *args, **kwargs: True)
-    import yaml
 
     # test custom headers
     monkeypatch.setattr(