add cram to unmapped bams

broadinstitute · Jan 13, 2025 · 764ee37 · 764ee37
1 parent ed188ad
commit 764ee37
Show file tree

Hide file tree

Showing 3 changed files with 425 additions and 9 deletions.
diff --git a/.dockstore.yml b/.dockstore.yml
@@ -59,6 +59,10 @@ workflows:
     subclass: WDL
     primaryDescriptorPath: /pipelines/cemba/cemba_methylcseq/CEMBA.wdl
 
+  - name: CramToUnmappedBams
+    subclass: WDL
+    primaryDescriptorPath: /pipelines/broad/reprocessing/cram_to_unmapped_bams/CramToUnmappedBams.wdl
+
   - name: ReblockGVCF
     subclass: WDL
     primaryDescriptorPath: /pipelines/broad/dna_seq/germline/joint_genotyping/reblocking/ReblockGVCF.wdl
@@ -123,6 +127,10 @@ workflows:
     subclass: WDL
     primaryDescriptorPath: /pipelines/skylab/atac/atac.wdl
 
+  - name: TestCramToUnmappedBams
+    subclass: WDL
+    primaryDescriptorPath: /verification/test-wdls/TestCramToUnmappedBams.wdl
+
   - name: TestExomeGermlineSingleSample
     subclass: WDL
     primaryDescriptorPath: /verification/test-wdls/TestExomeGermlineSingleSample.wdl