0.1.0

What's Changed

• fix: correctly configure logging by @jsstevenson in #49
• fix: resolve logger ImportError by @korikuzma in #52
• chore: migrate project config + deps to pyproject.toml by @korikuzma in #54
• build!: require python >= 3.11 by @korikuzma in #55
• chore: migrate from pipenv to virtualenv by @korikuzma in #57
• fix: resolve TypeError by specifying kwarg n in pandas str.split by @korikuzma in #63
• style!: replace flake8 with ruff + update pre-commit config by @korikuzma in #58
• chore!: use src layout instead of flat layout by @korikuzma in #60
• feat: configure logging in cli by @korikuzma in #65
• build!: bump variation-normalizer to ~=0.11.0 by @korikuzma in #67

New Contributors

• @jsstevenson made their first contribution in #49

Full Changelog: 0.0.4-dev0...0.1.0

0.0.4-dev0

What's Changed

• feat!: update variation-normalizer version + cancer hotspots by @korikuzma in #40
• chore: remove requirements by @korikuzma in #41
• refactor!: remove gnomad by @korikuzma in #43
• refactor!: remove fastapi by @korikuzma in #44
• refactor: resolve pydantic deprecation warnings by @korikuzma in #45
• cicd: use pypi trusted publisher by @korikuzma in #46
• refactor: remove unused vars in init by @korikuzma in #48

Full Changelog: v0.0.3a6...0.0.4-dev0

v0.0.3a6: Merge pull request #32 from cancervariants/staging

• Update variation-normalizer dependency

v0.0.3a4: Merge pull request #28 from cancervariants/staging

• Allow data dir paths to be set by environment variables
• Use downloadable data for Cancer Hotspots + cBioPortal rather than APIs
  • File format is CSV

v0.0.3a3: Merge pull request #20 from cancervariants/issue-19

• Add id (md5 digest) to response object if data exists

v0.0.3a2: Merge pull request #18 from cancervariants/staging

• Replaces pandas dependency with xlrd (Cancer Hotspots)

v0.0.3a1: Merge pull request #15 from cancervariants/staging

• Removes matplotlib / seaborn and unused method to create graph for cBioPortal data
• Moves openpyxl, xlrd, xlwt to dev dependencies

v0.0.2: Merge pull request #11 from cancervariants/staging

• Move normalizing cancer hotspots data to evidence.dev.cli. This requires installing additional dev dependencies (pip install evidence-normalizer[dev])

v0.0.1: Merge pull request #6 from cancervariants/staging

• Adds initial data sources (gnomAD, cBioPortal, Cancer Hotspots)