add more biolerplate

src/gene/main.py

@@ -103,8 +103,8 @@ async def lifespan(app: FastAPI) -> AsyncGenerator:
 def search(
     request: Request,
     q: Annotated[str, Query(..., description=q_descr)],
-    incl: Annotated[str | None, Query(None, description=incl_descr)],
-    excl: Annotated[str | None, Query(None, description=excl_descr)],
+    incl: Annotated[str | None, Query(description=incl_descr)] = None,
+    excl: Annotated[str | None, Query(description=excl_descr)] = None,
 ) -> SearchService:
     """Return strongest match concepts to query string provided by user.
 
@@ -192,7 +192,7 @@ def normalize_unmerged(
 
 
 @app.get(
-    "/service_info",
+    "/gene/service_info",
     summary="Get basic service information",
     description="Retrieve service metadata, such as versioning and contact info. Structured in conformance with the [GA4GH service info API specification](https://www.ga4gh.org/product/service-info/)",
     tags=[_Tag.META],

tests/unit/test_api.py

@@ -0,0 +1,42 @@
+"""Test FastAPI endpoint function."""
+
+import re
+from datetime import datetime
+
+import pytest
+from fastapi.testclient import TestClient
+
+from gene.main import app
+
+
+@pytest.fixture(scope="module")
+def api_client():
+    """Provide test API client"""
+    return TestClient(app)
+
+
+def test_service_info(api_client: TestClient):
+    """Test /service_info endpoint"""
+    response = api_client.get("/gene/service_info")
+    assert response.status_code == 200
+    expected_version_pattern = r"\d\.\d\."
+    response_json = response.json()
+    assert response_json["id"] == "org.genomicmedlab.gene-normalizer"
+    assert response_json["name"] == "Gene Normalizer"
+    assert response_json["type"]["group"] == "org.genomicmedlab"
+    assert response_json["type"]["artifact"] == "Gene Normalizer API"
+    assert re.match(expected_version_pattern, response_json["type"]["version"])
+    assert (
+        response_json["description"]
+        == "Tools for resolving ambiguous gene symbols to richly-annotated concepts"
+    )
+    assert response_json["organization"] == {
+        "name": "Genomic Medicine Lab at Nationwide Children's Hospital",
+        "url": "https://www.nationwidechildrens.org/specialties/institute-for-genomic-medicine/research-labs/wagner-lab",
+    }
+    assert response_json["contactUrl"] == "[email protected]"
+    assert (
+        response_json["documentationUrl"] == "https://gene-normalizer.readthedocs.io/"
+    )
+    assert datetime.fromisoformat(response_json["createdAt"])
+    assert re.match(expected_version_pattern, response_json["version"])