bugfix orthogonal interpolation

[pr4deepr]

Bug fix for issues:

• Shift in z planes of the deskewed stack #278
• Issue with linear interpolation during deskewing #276

Waiting for confirmation from @oleksiievetsno before merging.

Cheers
Pradeep

[pr4deepr]

@haesleinhuepf I think we ran some of the notebooks before we made some kernel changes, especially the flip z for backward compatbility
As far as I can tell, there are no breaking changes downstream..

[codecov-commenter]

Codecov Report

Patch coverage: 88.88% and project coverage change: -0.01% ⚠️

Comparison is base (efb38e9) 92.95% compared to head (4b879f8) 92.95%.

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Additional details and impacted files

@@            Coverage Diff             @@
##           master     #284      +/-   ##
==========================================
- Coverage   92.95%   92.95%   -0.01%     
==========================================
  Files         772      772              
  Lines       14300    14304       +4     
==========================================
+ Hits        13293    13296       +3     
- Misses       1007     1008       +1     

Files Changed	Coverage Δ
pyclesperanto_prototype/_tier8/_deskew_y.py	84.21% <75.00%> (-3.29%)	⬇️
...to_prototype/_tier8/_affine_transform_deskew_3d.py	94.28% <100.00%> (ø)
tests/test_skimage_imsave.py	100.00% <100.00%> (ø)

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[pr4deepr]

Hi @haesleinhuepf
I've checked the notebooks,
Minor issue with displaying the transposed images using cle.imshow:
https://github.com/clEsperanto/pyclesperanto_prototype/blob/dc1c641db5e39e5d1cca2edd53c52becdacc38b6/demo/transforms/deskew.ipynb

Cheers
Pradeep

[pr4deepr]

@haesleinhuepf

The error for tests is related to test_skimage_imsave function:

FAILED tests/test_skimage_imsave.py::test_skimage_imsave - ValueError: not enough samples for <PHOTOMETRIC.RGB: 2>: expected 3, got 1

For some reason it fails for python 3.8, 3.9, 3.10

[pr4deepr]

@haesleinhuepf , I modified the test to make test_skimage_save test work. Changes here:
a6fdaab