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basico 0.38

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@fbergmann fbergmann released this 13 Dec 15:46
· 189 commits to master since this release

Basico is a simplified python interface to COPASI. While all functionality from COPASI is exposed via automatically generated SWIG wrappers, this package aims to add a layer on top of that, to hide most of the complexity away when calling COPASI functions.

This release changes the behavior of add_reaction / set_reaction, when it comes to assigning a function definition to it. Previously, the reaction scheme would already have to have all modifiers of the function listed, before a function could be assigned. Now this is no longer necessary and modifiers will be automatically added to the reaction scheme, as long as the mapping to all modifiers is specified. See also the Editing reaction kinetics example in the documentation. ( fixes #29 )