Various published scripts - see comments in files
Almeida, S.C., Neiva, J., Sousa, F., Martins, N., Cox, C.J., Melo‐Ferreira, J., Guiry, M.D., Serrão, E.A. and Pearson, G.A., 2022. A low‐latitude species pump: Peripheral isolation, parapatric speciation and mating‐system evolution converge in a marine radiation. Molecular Ecology, 31(18), pp.4797-4817.
- locus.py
- locus_alignments_from_transcriptomes.py
- remove_gapped_and_ambiguous_codons.py