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See all in one page
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Objectives

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Introduction -

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Introduction


When we think about the data for a sequencing project, we often start by thinking about the sequencing data that we get back from the sequencing center. However, equally or more important is the data you’ve @@ -344,8 +343,7 @@

Objectives

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Notes


Notes about your experiment, including how you prepared your samples for sequencing, should be in your lab notebook, whether that’s a physical lab notebook or electronic lab notebook. For guidelines on good @@ -399,8 +396,7 @@

Show me the solution

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Unique identifiers -

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Unique identifiers

Unique identifiers are a unique name for a sample or set of sequencing data. They are names for that data that only exist for that @@ -409,8 +405,7 @@

Unique identifiersData about the experiment -

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Data about the experiment


Data about the experiment is usually collected in spreadsheets, like Excel.

What type of data to collect depends on your experiment and there are @@ -420,8 +415,7 @@

Unique identifiers
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Metadata standards -

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Metadata standards

Many fields have particular ways that they structure their metadata so it’s consistent and can be used across the field.

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Metadata standardsStructuring data in spreadsheets -

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Structuring data in spreadsheets


Regardless of the type of data you’re collecting, there are standard ways to enter that data into the spreadsheet to make it easier to analyze later. We often enter data in a way that makes it easy for us as @@ -471,8 +464,7 @@

Metadata standards
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Discussion -

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Discussion

This is some potential spreadsheet data generated about a sequencing experiment. With the person next to you, for about 2 minutes, discuss @@ -487,7 +479,7 @@

Discussion

Data Carpentry Ecology spreadsheet lesson. Not all are present in this @@ -524,8 +516,7 @@

Further notes on data tidiness

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Key Points -

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Key Points

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Key Points